Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00257 ATGGTGGTGGAACATTCTCTCCAAAAGAGTTTGGTGGGTTGGGCAATTCAAGGGGACGACCAGCTCGTTCTGGACTGGGCAAGACGCATTAAGATTGCAGCTGGGGCAGCCCGGGGAATAGCTTATCTTCATGAAGACTGCCATCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCAGACTTCGGGCTGGCTAAATTAGCTCTTGATGCACAGACTCATATAACCACTCGTGTCGTGGGAACTTTCGGATATGTTGCCCCTGAATATGCATCGAGTGGGAAGTTAACTGAGAGATCGGATGTATATTCTTTTGGAGTCGTACTTCTCGAGCTGATTACTGGTCGAAAGGCCGTTGATGCATCCCAACCGATGGGGGACGAGAGCCTTGTTGAATGGGGTCGGCCTTTACTAAACCATGCGCTCCACAGCCAAGATTTTGAAAGGTTGGTGGACCCAAGGCTTGAAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGCGTTCGGCATGCGTCCGCAAAGAGACCACAGATGGGACAGGTTGTTCGAGCTTTTGATAGTTTAGCTGCAACAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCCTTCGACTCCGGTCAAAAGTCTGCTGAGATTAGGTTTTTCCGAATGCTGGCATTTGGAAACCAAGATTACAGCTCAGACTTTTATAGCCAAGGTAGCTCAAATGCCTGA 777 46.85 MVVEHSLQKSLVGWAIQGDDQLVLDWARRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGDESLVEWGRPLLNHALHSQDFERLVDPRLERNYVESEMLKMIGIAAACVRHASAKRPQMGQVVRAFDSLAATDLSNGMRFGESQAFDSGQKSAEIRFFRMLAFGNQDYSSDFYSQGSSNA 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1497415 1499376 + Cp4.1LG09g02660.1 Cpe09g00257 474623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00257 258 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK10 19 251 - -
Cpe09g00257 258 Gene3D Transferase(Phosphotransferase) domain 1 5 223 - -
Cpe09g00257 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Cpe09g00257 258 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00257 258 SUPERFAMILY Protein kinase-like (PK-like) 3 202 IPR011009 -
Cpe09g00257 258 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00257 258 Pfam Protein kinase domain 23 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00257 258 PANTHER OS01G0253100 PROTEIN 19 251 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01381 Cpe-Chr1:8300401 Cpe09g00257 Cpe-Chr9:1497415 2.22E-110 dispersed
Cpe07g01010 Cpe-Chr7:9183558 Cpe09g00257 Cpe-Chr9:1497415 1.59E-86 dispersed
Cpe09g00257 Cpe-Chr9:1497415 Cpe05g01252 Cpe-Chr5:8763463 8.23E-81 dispersed
Cpe13g01009 Cpe-Chr13:8308041 Cpe09g00257 Cpe-Chr9:1497415 1.17E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62591 PF00069 Pkinase 2.60E-27 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00257 - - cmo:103489228 432.18