Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00258 ATGAGCGGTGGCAGAAGGAGGAAGCTGCATTTTAGCAAGATCTACTCGTTTGCGTGTGGGAAAGCTTCTTTGAAAGATGATCACTCACAAATTGGGGGTCCTGGGTTTTCTCGAGTGGTGTTCTGTAATGAAGCTGAGTGTATTGAGGCTGAAATACGTAACTATGTTGATAATCATGTTAGTACCACTAAGTATACTTTGGCTACTTTCTTGCCTAAGTCATTGTTTGAGCAATTCAGGAGGGTGGCTAATTTCTTCTTTTTAGTTACTGGGATTCTTGCTTTTACTCCTCTTGCTCCTTACACAGCCGTCAGTGCAATTCTTCCTCTTATTATTGTCATTTCAGCTACTATGATCAAGGAAGGTATTGAAGATTGGAGGCGGAAGAAACAGGACATTCAGGTCAACACTAGAAAGGTTAAAGTGCATCAAGGTAATGGAGTTTTTGCTCATACAGAGTGGAAAACTTTGAGGGTGGGTAATGTAGTGAGAGTGGAAAAGGATGAATTCTTTCCAGCAGATATCATCTTGCTTTCATCCAGTTACGAGGATGCCGTCTGCTATGTCGAGACAATGAACCTCGACGGTGAGACAAATTTGAAACTAAAACAAGCATTGGAGGTAACTTCGCGTATGAACGAGGATTCGATCTTCAAAAGCTTTAAGGCTATCATAAAATGTGAGGATCCAAATGCAAATTTATACAGTTTTGTTGGAAGTATGGAGTTGGAAGAGCAACAATATCCGCTATCACCTCAACAACTACTCCTTCGAGACTCGAAACTCCGGAATACAGATTATATATATGGGGTTGTTGTCTTTACGGGTCGCGACACAAAGGTTTTTCAAAATTCTACTGACCCGCCTTCGAAAAGAAGCAAAGTCGAGAGGAAAATGGATCAAATTATATACTTTTTGTTTGGTCTTCTGTTCTTGCTTGCTCTTATAGGATCTATCTTTTTTGGCTTTGTGACTGGCGATGATTTGAACAATGGGAAAATGAAGAGATGGTATCTCAGGCCTGATGATGCTGAAGTTTTCTATGATTCAAAAAGAGCTCCATTAGCTGCAATTTTCCATTTTCTTACAGCACTGATGTTGTATAACTACTTCATTCCGATATCACTCTACGTGTCGATAGAGATCGTGAAAGTTCTTCAGAGCATATTCATCAATCAAGATATTAATATGTACTACGAAGAAGCTAATAAGCCTGCACGTGCTCGCACCTCGAATTTGAATGAAGAACTTGGTCAAGTTGATACAGTACTTTCTGACAAGACGGGAACCCTGACGTGTAATTCAATGGAGTTCATCAAGTGTTCAGTGGCCGGGACGGCTTATGGTCGTGGTTTCACAGAGGTCGAAAGGGCCATTGGTGGACTGAAGAATTCACCATTGTATGAAGCTGTAAATGGGGGGAATCAACAAGAGGATGTCACTAAGAAAACTTCACATGTCAAGGGCTTTAACTTTCAAGATGATAGAATTATGAATGGGAACTGGGTTTATGAGCCTAATGCAAATGTCATCCAAATGTTTTTTCGTCTTCTTGCCACTTGTCATACGGCGATACCTGAAATCAACGAGCACAGTGGCGAGGTGTCTTATGAGGCCGAATCACCGGATGAAGCAGCGTTTGTGATTGCAGCTAGGGAGCTAGGCTTTGAGTTCTATAAAAGAACACAGTCAAGCATATCACTCCATGAGTTTGAACCTTCATTAGGCAAGAAAGTTGATAGTGTCATGTTTGAAAGGCTTGGAAAGAATGGAAGGGAGTTTGAAGAGAGGACTAAGGAACATGTCAGCGAGTACGCCGATGCAGGCTTGAGGACTTTGATACTCGCCTACCGTGAGCTTGACGAGGAAGAATACAGAGAATTTCATCATAAGTTCACTATGGCCAAAACCTCAGTTGATGCAGATAGAGAATCATTGATTGATAAACTTACAGACAAAATTGAAAAGAATCTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCCGAGTGCATCGACAGGCTCGCTCAGGCGGGAATTAAGATCTGGGTTTTGACGGGCGACAAAATGGAGACTGCCATAAATATTGGTTTTGCCTGTAGCTTACTAAGAGAAGATATGAAGCAGATTGTCATTACTCTGGAGTCATCAGAAATTCAGGCAATAGAGAAGTCAGGGGATAAGGCTTCCATCATCAAGGCGTCGAGGCAATGTGTTCGTGATCAGATTACTCGAGGGAGAGCTCAGATCAATTCATCAAGTGGGTCATCTGAAGCATTTGCATTAATCATTGATGGAAAATCGCTTTCTTATGCTTTAGAGGACAGTATGAAGGCATCGTTTCTCGATCTAACGATACGTTGCGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCATTGGTAACAAGGTTGGTTAAAACTGGAACACGAAAAACAACTTTAGCTATCGGCGATGGTGCTAACGATGTAGGAATGCTTCAAGAAGCGGATATTGGAGTCGGAATTAGTGGTGCTGAAGGAATGCAGGCCGTTATGTCGAGCGACGTTGCGATTGCTCAGTTTAAATATTTAGAGCGCCTGCTTCTCGTGCATGGACATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTCTTCTATAAGAATATTACTTTTGGTTTTACCATATTCTTATACGAAGCATTCACATCATTCTCTGGGGAACCTGTATATAATGATTGGTTTTTATCACTTTACAACGTTTTCTTCTCGTCGCTTCCAGTCGTTGCTTTGGGAGTCTTCGATCAGGACGTATCTGCACGGCTCTGCCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAGAATGTTCATTTCAGCTGGCTCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCTGTGATCATTTTCTTCCTTTGCACTGGCGCACTTGAGCATCAGGCATTCAACTCCGATGGGAAACCTGCAGGGCGGGAAATTCTGGGTGCGACGATGTACTCTTGTGTCGTTTGGGTTGTGAACTTGCAAATGGCGCTCGCTGTTAGCTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCCATTTCAATTTGGTACATTTTTCTCCTGATTTATGAGTCCATGACCCCCACCCTTTCAACCAATGCTTACAAGATCTTCACTGAAGTCCTTGCCCCTGGCCCTTCCTACTGGCTTGTCCTTTTCTTTGTGGTGATCTCGACACTCATTCCTTACTTCTCCTACTCAGCATTACAGATGAGGTTCTTTCCCATGTATCATCAAATGATTTTATGGATTAGAAATGAAGGGCAACTAGACAACCAGGAGTACTGTAATATGTTGTGGAAGTACAAATTCCGATCGACGAGTGTAGGTTCCACAGCACGGTTAGCAGCCAAAAGGAACAACTCAAAACCAAGAAACCAGACTTATATTTGA 3477 42.25 MSGGRRRKLHFSKIYSFACGKASLKDDHSQIGGPGFSRVVFCNEAECIEAEIRNYVDNHVSTTKYTLATFLPKSLFEQFRRVANFFFLVTGILAFTPLAPYTAVSAILPLIIVISATMIKEGIEDWRRKKQDIQVNTRKVKVHQGNGVFAHTEWKTLRVGNVVRVEKDEFFPADIILLSSSYEDAVCYVETMNLDGETNLKLKQALEVTSRMNEDSIFKSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVFQNSTDPPSKRSKVERKMDQIIYFLFGLLFLLALIGSIFFGFVTGDDLNNGKMKRWYLRPDDAEVFYDSKRAPLAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEANKPARARTSNLNEELGQVDTVLSDKTGTLTCNSMEFIKCSVAGTAYGRGFTEVERAIGGLKNSPLYEAVNGGNQQEDVTKKTSHVKGFNFQDDRIMNGNWVYEPNANVIQMFFRLLATCHTAIPEINEHSGEVSYEAESPDEAAFVIAARELGFEFYKRTQSSISLHEFEPSLGKKVDSVMFERLGKNGREFEERTKEHVSEYADAGLRTLILAYRELDEEEYREFHHKFTMAKTSVDADRESLIDKLTDKIEKNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLREDMKQIVITLESSEIQAIEKSGDKASIIKASRQCVRDQITRGRAQINSSSGSSEAFALIIDGKSLSYALEDSMKASFLDLTIRCASVICCRSSPKQKALVTRLVKTGTRKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGEPVYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVHFSWLRILSWMFNGLCSAVIIFFLCTGALEHQAFNSDGKPAGREILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYESMTPTLSTNAYKIFTEVLAPGPSYWLVLFFVVISTLIPYFSYSALQMRFFPMYHQMILWIRNEGQLDNQEYCNMLWKYKFRSTSVGSTARLAAKRNNSKPRNQTYI 1158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1499250 1509484 - Cp4.1LG09g02710.1 Cpe09g00258 474624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00258 1158 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1103 IPR023298 -
Cpe09g00258 1158 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Cpe09g00258 1158 SFLD Haloacid Dehalogenase 408 876 - -
Cpe09g00258 1158 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 575 1150 - -
Cpe09g00258 1158 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 570 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe09g00258 1158 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 577 1109 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe09g00258 1158 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 573 - -
Cpe09g00258 1158 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 662 IPR023299 GO:0000166
Cpe09g00258 1158 SFLD p-type atpase 408 876 IPR044492 -
Cpe09g00258 1158 Gene3D - 657 865 IPR023214 -
Cpe09g00258 1158 SUPERFAMILY HAD-like 419 880 IPR036412 -
Cpe09g00258 1158 Gene3D - 115 286 - -
Cpe09g00258 1158 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 573 - -
Cpe09g00258 1158 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Cpe09g00258 1158 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 575 1150 - -
Cpe09g00258 1158 Gene3D - 469 592 IPR023299 GO:0000166
Cpe09g00258 1158 Pfam Phospholipid-translocating P-type ATPase C-terminal 853 1103 IPR032630 -
Cpe09g00258 1158 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 797 907 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe09g00258 1158 PRINTS P-type cation-transporting ATPase superfamily signature 825 844 - -
Cpe09g00258 1158 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cpe09g00258 1158 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cpe09g00258 1158 CDD P-type_ATPase_APLT_Dnf-like 57 985 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00258 Cpe13g00024 CCT
Cpe09g00258 Cpe13g00024 ECH
Cpe01g01379 Cpe09g00258 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00258 Cpe-Chr9:1499250 Cpe12g00609 Cpe-Chr12:6053066 0 dispersed
Cpe01g01379 Cpe-Chr1:8291914 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
Cpe13g00024 Cpe-Chr13:204020 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
Cpe20g00099 Cpe-Chr20:522155 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00258 K01530 - csv:101207148 2021.9