Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe09g00268 | ATGGCCGCAGCATTGCCCTCACTTGCCCCATTGCTCATTTTTGCCAGAATTTTGGGACTGCTTGTTGCCGTTCTGATCTTCGTTTGGGTTCTTGCCTTCAGTTCTAGCTTCGGCCATCTTCCCCCCGCCCCAGATGACCGTATCTTCGATGTTCTGCATCCTTTGTTCATGGTAATTGGTTTCATTCTACTCAGCGGAGAAGCCATTTTGGTTCATAGTTGGCTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATCTGATTCTTCAAGGGCTGGCTTTGACTTCTGGGTTTTTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTCTGGCTAACTTCCACAGCTTACATTCTTGGTTGGGTTTGAGCGTTTTCACTTTGTTCGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCTCTGGAGGGAGGTGAGAGCAACAAGAGAAAGAGTGCTGCCATGGCATGTGTTCCTTGGGCTATACAGTTATGCATTGGCAGTGACAGTAGCAGAAACAGGGCTTCTAGAGAAGCTGACATTGTTGCAAACAAAGAGAAATGTCCCTAGAAAAGGCCCTGAAGCCATGGTTGTCAACAGTCTAGGCCTGGCCTTGGCTTTGCTCGGTGGAATTGTGGTGCTCACTGCTATATCTCCTAAATATACTCCTTCACTTCCCACCATCAAACAGCCATTTGTCTCCAATTCAAAGCCATTGTCTTCTTAA | 732 | 46.99 | MAAALPSLAPLLIFARILGLLVAVLIFVWVLAFSSSFGHLPPAPDDRIFDVLHPLFMVIGFILLSGEAILVHSWLPGSRNLRKSVHLILQGLALTSGFFGIWTKFHWDRGFLANFHSLHSWLGLSVFTLFGAQWMMGFLSFWLWREVRATRERVLPWHVFLGLYSYALAVTVAETGLLEKLTLLQTKRNVPRKGPEAMVVNSLGLALALLGGIVVLTAISPKYTPSLPTIKQPFVSNSKPLSS | 243 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1559055 | 1561556 | + | Cp4.1LG09g02610.1 | Cpe09g00268 | 474634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe09g00268 | 243 | Pfam | Eukaryotic cytochrome b561 | 52 | 182 | IPR006593 | - | |
| Cpe09g00268 | 243 | Gene3D | - | 2 | 226 | - | - | |
| Cpe09g00268 | 243 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 2 | 227 | - | - | |
| Cpe09g00268 | 243 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - | |
| Cpe09g00268 | 243 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Cpe09g00268 | 243 | PANTHER | CYTOCHROME B561-RELATED | 2 | 227 | IPR043205 | GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g00656 | Cpe-Chr5:3995270 | Cpe09g00268 | Cpe-Chr9:1559055 | 5.69E-37 | dispersed | |
| Cpe09g00268 | Cpe-Chr9:1559055 | Cpe15g00317 | Cpe-Chr15:4141089 | 3.94E-37 | dispersed | |
| Cpe13g01013 | Cpe-Chr13:8342520 | Cpe09g00268 | Cpe-Chr9:1559055 | 1.97E-16 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe09g00268 | K08360 | - | csv:101205948 | 403.29 |