Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00304 | ATGAGAATGAGCTGCAATGGCTGCCGGATCCTTCGCAAAGGCTGCAGCCATGACTGTATTATCAGACCTTGTCTTCAATGGATCCCCTCCCCTGATTCTCAGGCCAACGCCACCATCTTTCTCGCCAAATTCTACGGTCGCGCCGGCCTCTTCAACCTCATCACTGCCGCTGCCGAGCACCTCCGCCCGGCTATTTTCAAGTCGTTGCTGTACGAGGCATGCGGCCGGATGGTGAATCCGGTCTACGGCTCCGTCGGATTGCTCTGCTCCGGCGACTGGGATAAGTGTCAGGCCGCCGTCGACGCCGTGTTGACCGGATCCATGATCGTCGAACCAGACGCGCCGCTGTCAAACACTAACCTTTCCCTTAAATGCTGCGACATTCGTCATGTTTGTAACGACACCAATTTGGCAGTTCCCGGCGAGCTTCACAAGGGCAAGACTCGGAACCGGTTCAAAAAGCCCGACAACCGGACCAAATCCAAACCCGGACCGGGTAATGAATTGGGAAGTGGGTCGAATGTGGAGGTGATAGAGATAGACCGAATGGCGGATGATTTGATGACGAACCGGAGAAAACCGGGTTGGGTTTTGAGAAATGGAATGTGGGTTGAGGAGGAGGATGTTGCGCTGGAGCTGACTCTTAATTCGGCTCAGTAA | 660 | 54.7 | MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTNLSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGNELGSGSNVEVIEIDRMADDLMTNRRKPGWVLRNGMWVEEEDVALELTLNSAQ | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1789293 | 1790689 | - | Cp4.1LG09g03080.1 | Cpe09g00304 | 474670 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00304 | 219 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 41-LIKE | 1 | 183 | - | - | |
Cpe09g00304 | 219 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 103 | IPR004883 | - | |
Cpe09g00304 | 219 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Cpe09g00304 | 219 | MobiDBLite | consensus disorder prediction | 146 | 175 | - | - | |
Cpe09g00304 | 219 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 183 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g00304 | Cpe-Chr9:1789293 | Cpe19g00663 | Cpe-Chr19:5304244 | 1.77E-47 | dispersed | |
Cpe18g00757 | Cpe-Chr18:7279054 | Cpe09g00304 | Cpe-Chr9:1789293 | 1.58E-62 | wgd | |
Cpe04g01407 | Cpe-Chr4:11336629 | Cpe09g00304 | Cpe-Chr9:1789293 | 1.21E-65 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49981 | PF03195 | LOB | 5.80E-23 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00304 | - | - | cmax:111467594 | 451.44 |