Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00317 ATGGCTTCCAGAGAAGGGAGGCGTCGCCATCATCATCATAATCTGGTGCCTCTTGCTGCTTTGATCAGTAAAGAGGTGAGGAATGAGAGATTGGAGAAGCCGACTATAAGATATGGGAGTGCTGCGCAGTCTAGGAAGGGGGAGGATTATTTTCTTATGAAAACTGATTGTCAGCGAGTACCTGGGAACCCTTCATCCACTTTTTCTGTATTTGCTATATTTGATGGACACAATGGAAATGCTGCTGCAATTTTCACCAGGGAACATTTGTTGAGCCATGTCTTAGGTGCGCTTCCTCGTGGCCTCGGGCAGGAGGAGTGGCTTCAAGCTCTACCTCGAGCTTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAAAGCCGAGGTGAAACTTCTGGAACTACAGCTACGTTTGTAATCATCGATGGATGGACAGTGACAGTAGCGTCGGTTGGAGACTCTCGATGTGTTTTAGATACTCAGGGTGGTGCTGTCTCTGCGTTAACGATCGATCATAGACTTGAAGATAATGTTGAAGAGCGAGAACGTGTGACTGCCAGCGGTGGCGAAATCGGAAGATTAAGCATTGTTGGTGGTGCTGAGATCGGTCCGCTCCGGTGTTGGCCTGGAGGTTTATGCCTTTCTCGATCGATCGGAGACCGGGACGTTGGAGAGTTTATAGTTCCGATTCCATTTGTTAAACAAGTAAAGTTATCTAATGCTGGTGGGAGGCTTATAATTGCTTCGGATGGCATCTGGGACGCCCTATCATCGGATATGGCTGCAAAGTCCTGCCGTGGACTACCGGCCGAGCTCGCTGCTAGGCAAGAAACGTTAAGAACAAGAGGGTTGAAAGATGATACAACCTGCATAGTTGTAGACATAATCCCTCCTGATAACTCAGCTCAGTCTTCTCCTCCTCCAAAGAAACAAAGCGTTCTGAAATCTCTATTGTTCAGGAAAAAGTCTCACAGTTCTAATAAGTTATCGAAGAAACTATCAGCTATCGGTCTCGTGGAAGAACTATTTGAAGACGGCTCCGCCATGCTGGCCGACAGGCTTGGAAGTGTAGAGTTGAGCGGATCAAGACATGGCACACCCAGCCTATTCACTTGTGCTATATGTCAAGTGGATCTTGCACCCAGTGAGGGCATCTCTGTTCATGCTGGCTCCATCTTCTCCACCAGTTCAAAGCCATGGCAAGGCCCTTTCCTCTGCGCCGATTGTCGAAACAAGAAGGACGCCATGGAAGGAAAACGTCCGAGTGGGGTGCGAGTGGCGTAG 1287 48.48 MASREGRRRHHHHNLVPLAALISKEVRNERLEKPTIRYGSAAQSRKGEDYFLMKTDCQRVPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCVLDTQGGAVSALTIDHRLEDNVEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDRDVGEFIVPIPFVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQETLRTRGLKDDTTCIVVDIIPPDNSAQSSPPPKKQSVLKSLLFRKKSHSSNKLSKKLSAIGLVEELFEDGSAMLADRLGSVELSGSRHGTPSLFTCAICQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1882819 1888388 - Cp4.1LG09g03090.1 Cpe09g00317 474683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00317 428 SMART PP2C_4 27 294 IPR001932 -
Cpe09g00317 428 SMART PP2C_SIG_2 53 296 IPR001932 -
Cpe09g00317 428 Pfam Protein phosphatase 2C 63 267 IPR001932 -
Cpe09g00317 428 PANTHER ALPHABET, ISOFORM E-RELATED 6 428 - -
Cpe09g00317 428 SUPERFAMILY PP2C-like 43 296 IPR036457 -
Cpe09g00317 428 CDD PP2Cc 36 296 IPR001932 -
Cpe09g00317 428 Gene3D - 36 303 IPR036457 -
Cpe09g00317 428 ProSiteProfiles PPM-type phosphatase domain profile. 30 296 IPR001932 -
Cpe09g00317 428 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 6 428 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01332 Cpe09g00317 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00172 Cpe-Chr2:879240 Cpe09g00317 Cpe-Chr9:1882819 2.26E-167 dispersed
Cpe04g00234 Cpe-Chr4:2873135 Cpe09g00317 Cpe-Chr9:1882819 0 dispersed
Cpe06g00152 Cpe-Chr6:825895 Cpe09g00317 Cpe-Chr9:1882819 2.92E-180 dispersed
Cpe09g00317 Cpe-Chr9:1882819 Cpe18g00033 Cpe-Chr18:574342 0 dispersed
Cpe01g01332 Cpe-Chr1:8016062 Cpe09g00317 Cpe-Chr9:1882819 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00317 - - csv:101216777 792.727