Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00320 ATGGAAAACCCTCCTTCCATCTCCTTCATCTTTCTCCTCTGCAACTTTTGTCTTTCAATGGCGGCTTTGAACGACGAGGGCACTGCCCTTTTCTCCTTCAAACAGTTCATCACAGAAGACCCAGACGGCTCCCTCAGCAACTGGAATTCTTCAGATCAAAACCCTTGTTCTTGGAATGGCGTTACATGCAATGATCTAAGAGTCGTTTCCCTTAGTATTCCCAAGAAGAATCTCAAAGGGATTCTCCCTTCTTCGTTGGGGATTCTTTCTCACCTTCGCCATGTGAATCTAAGGAACAATAAACTCCATGGAACTCTGCCATTGGAGCTTTTCCAAGCTAATGGAATACAGAGCTTGGTGATTTTTGGGAATTCCTTTTCTGGGTTTGTCCCAAATGATGTTGGTAAGCTCAAAAACCTTCAAATCTTGGATTTATCTCACAATTTCTTTAATGGGTCGTTGCCTGTTTCATTGATCCAATGCACAAGACTTAGAATTCTTGATATTAGTCACAATAATCTTACTGATGCTCTGCCTGTTGGACTTGGTTCTAGTTTGAATTTCTTGGAAAAATTGGATGTTTCTCACAATATGTTCAATGGTTCAATCCCTATGGATATTGGTAATCTCTCTAGCTTGCAAGGAACTGTTGATTTCTCATATAATTTGTTCTCTGGTTCAATCCCTGCTAGCTTAGGAAACCTTCCTGAAAAGGTTTATATTGATCTTAGTTATAATGATTTGAGTGGTTCAATACCCCAAAATGGTGCTCTTATGAACAGAGGACCTACTGCTTTCATTGGTAATCCTGGTCTTTGTGGACCTCCATTGAAGAATCCGTGTTCTTCGGAAGCTCCAGGCGCGAGTTCGCCGTCGTCATTCCCCTTTTTCCCAGATAATTCTCCACCTGGGAGGTCTGAGGGTAATGGAGGGTTGAGTAGGAGCACGTTGGTTGCGATAATCGTCGGCGACATTATCGGTATCTGTCTGATTGGGTTGCTGTTTTCGTATTGCTATTCGAGGTTTTGGACTCGTAGGAATGGGAAGAAGGTAGAGCAATCTAAAGATGGTCTTCATAAGGGAGAGAAAGGAAGAAAGGATTGTCTCTGCTTTCGAAAGGGTGAATCCGAGAATGTTTCGGAGCATGTTCAGCAGTTTGATCTCGTAGCTCTTGATTCAAACGTGACGTTTGATCTCGACGAACTTCTTAAGGCGTCGGCGTTCGTTTTGGGGAAAAGTAGTATCGGGATAGTGTATAAAGTCGTGCTCGAAAATGGCCTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCACAAAGGTTTAAAGAGTTTCAAACTGAAGTTGAAGCAATTGGGAAGCTAAGGCATCCAAATGTTGTTGGCCTTAGAGCTTATTATTGGTCTGTTGATGAAAAACTGCTTATTTATGATTACATATCAAATGGAAGCCTTGCATTTGCCATTCATGGGAAGCCCGGGACATCGTCGTTTTCACCGTTACCGTGGTCTGTTCGGTTAAGAATCATGGAAGGTATAGCAAAAGGGTTGATTTACTTGCATGAGTTTAGCCCCAAAAAGTATGTCCATGGCAATTTGAAGACGAACAACGTACTTCTCGGACACAATATGGTACCTCATATTTCGAATTTCGGGCTTGCTCGACTTGTTAACATCGCTGGAGGATCTCCGACTCTGCAATCGGGTCACTTGACAGACGAAAAACCCCACGAGAAACAGCTTAAGTCTGCAACTTCTGAAGCTAGTACATTCAGTTCTAATATGAATACTTACTACCAAGCCCCAGAAGCATTAAAGGTCGTGAAGCCATCACAGAAATGGGACGTTTACTCGTTCGGTGTGATATTACTCGAAATGATCACCGGAAGGTTGCCGATAGTTCAAGTTGGAGCGTCGGAGATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCGGATGTTATAGATCCGTCTTTGACACCGGACGACGATACAGACGAGGAGATTATCACGGTTTTGAAGATATGTTTAGCTTGTGTTCAAAATAGTCCCGAAAGAAGACCGACGATGAGACATGTTTCTGATGCATTGAGTAGGATGGTTGTGAATCCAAAGTGA 2136 42.84 MENPPSISFIFLLCNFCLSMAALNDEGTALFSFKQFITEDPDGSLSNWNSSDQNPCSWNGVTCNDLRVVSLSIPKKNLKGILPSSLGILSHLRHVNLRNNKLHGTLPLELFQANGIQSLVIFGNSFSGFVPNDVGKLKNLQILDLSHNFFNGSLPVSLIQCTRLRILDISHNNLTDALPVGLGSSLNFLEKLDVSHNMFNGSIPMDIGNLSSLQGTVDFSYNLFSGSIPASLGNLPEKVYIDLSYNDLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSEAPGASSPSSFPFFPDNSPPGRSEGNGGLSRSTLVAIIVGDIIGICLIGLLFSYCYSRFWTRRNGKKVEQSKDGLHKGEKGRKDCLCFRKGESENVSEHVQQFDLVALDSNVTFDLDELLKASAFVLGKSSIGIVYKVVLENGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNVVGLRAYYWSVDEKLLIYDYISNGSLAFAIHGKPGTSSFSPLPWSVRLRIMEGIAKGLIYLHEFSPKKYVHGNLKTNNVLLGHNMVPHISNFGLARLVNIAGGSPTLQSGHLTDEKPHEKQLKSATSEASTFSSNMNTYYQAPEALKVVKPSQKWDVYSFGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLTPDDDTDEEIITVLKICLACVQNSPERRPTMRHVSDALSRMVVNPK 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1913703 1916426 + Cp4.1LG09g03180.1 Cpe09g00320 474686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00320 711 Gene3D Phosphorylase Kinase; domain 1 372 479 - -
Cpe09g00320 711 Gene3D Transferase(Phosphotransferase) domain 1 480 710 - -
Cpe09g00320 711 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 709 - -
Cpe09g00320 711 CDD STKc_IRAK 410 706 - -
Cpe09g00320 711 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 709 - -
Cpe09g00320 711 SMART LRR_typ_2 89 113 IPR003591 -
Cpe09g00320 711 SMART LRR_typ_2 137 161 IPR003591 -
Cpe09g00320 711 SMART LRR_typ_2 162 185 IPR003591 -
Cpe09g00320 711 Pfam Leucine Rich Repeat 139 157 IPR001611 GO:0005515
Cpe09g00320 711 SUPERFAMILY L domain-like 24 278 - -
Cpe09g00320 711 Pfam Protein kinase domain 410 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00320 711 ProSiteProfiles Protein kinase domain profile. 404 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00320 711 MobiDBLite consensus disorder prediction 283 309 - -
Cpe09g00320 711 Gene3D Ribonuclease Inhibitor 17 75 IPR032675 -
Cpe09g00320 711 Gene3D Ribonuclease Inhibitor 76 284 IPR032675 -
Cpe09g00320 711 SUPERFAMILY Protein kinase-like (PK-like) 409 703 IPR011009 -
Cpe09g00320 711 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01329 Cpe09g00320 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01609 Cpe-Chr1:9834323 Cpe09g00320 Cpe-Chr9:1913703 0 dispersed
Cpe09g00320 Cpe-Chr9:1913703 Cpe09g00581 Cpe-Chr9:4019405 0 dispersed
Cpe01g01329 Cpe-Chr1:7998923 Cpe09g00320 Cpe-Chr9:1913703 0 wgd
Cpe01g01802 Cpe-Chr1:14985673 Cpe09g00320 Cpe-Chr9:1913703 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62595 PF00069 Pkinase 4.10E-29 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00320 - - cpep:111801478 1346.26