Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00347 ATGAGTATCTCTCCCTCTGCTTCTTCTTGCTCTTCGTCTTCCTCTTCTTGCGTCGGTTCAGATTCCGCCATTAATATTAAGAAGAAGAAGAATAATCTCTCCGCTCCTCTCCGGCCGCACTCGGAGAAGGCCAGAATCAAGCGGCGACGGAGGAATCAGGACGAATCGAAACGCGAGATTCATAATAACAACAGCAGTGGAATCAACAACAACAACAACGCATCTTCCGCTCGTCGGAGTTCCATTTACAGAGGAGTCACGAGGCATCGATGGACCGGCCGGTTCGAAGCTCATCTTTGGGACAAGAGTTCATGGAATAGCATTCAGAACAAAAAAGGAAGGCAAGCTGCAGCACGAACTTATGACCTTGCTGCCCTCAAATACTGGGGACCGGAAACCACTCTCAATTTCCCGGCAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTAACGAAGGAAGAATATTTGGCGTCGTTGCGGCGGCGGAGCAGTGGCTTTTCTAGAGGCGTTTCTAAGTACCGCGGCGTGGCCCGACACCACTACAATGGCCGGTGGGAGGCTCGGATTGGCCGCGTTTTTGGAAGCAAGTATCTTTACTTGGGAACTTACAACACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCAATTGAATACAGAGGACCCAATGCAGTTACCAACTTTGACATTAGCAATTACATTGGGAGGAGATTAGAGACCAAATCATCAGTTTTTGAAGCAGCTGAGCTACCAAAAGAGGAGCCCAATGATTCCCCTGTTTCTTCTGAGGGAGAAGTTGTGTATCAGCCCGAAGAACAGCAAACGACGTCGTGGCCGAGCCTTCAATTCTCGACGATGCTTCCGTCGATCGAGAATAGCCCGTCAATGGGTGTCATGGGAGACGATCAGGATCTCAATTGGTCTTTCTTAGACACCGGATTCGTCGAGGTGCCTGACCTCCCGCTTGAGAAAACGAGTGAGTTAGCTGATCTCTACTTCGATGAGATCGGATTTGAAGACGACATTGGCTTGATGTTCGAAACGAGCATTGAGGATGGTAAAGAAGATCTTAATGTTGGGAAGATGGAGATGAACAATGCTCCTTCGCCATCGTCTTCGTCGATAATAACCAACTCGGTTTCGTGCGAAAAAGATGAGATTGTTGGGTTTTGTTGA 1185 48.35 MSISPSASSCSSSSSSCVGSDSAINIKKKKNNLSAPLRPHSEKARIKRRRRNQDESKREIHNNNSSGINNNNNASSARRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGRQAAARTYDLAALKYWGPETTLNFPAESYTNEMEEMRKVTKEEYLASLRRRSSGFSRGVSKYRGVARHHYNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGPNAVTNFDISNYIGRRLETKSSVFEAAELPKEEPNDSPVSSEGEVVYQPEEQQTTSWPSLQFSTMLPSIENSPSMGVMGDDQDLNWSFLDTGFVEVPDLPLEKTSELADLYFDEIGFEDDIGLMFETSIEDGKEDLNVGKMEMNNAPSPSSSSIITNSVSCEKDEIVGFC 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2099690 2103299 + Cp4.1LG09g03430.1 Cpe09g00347 474713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00347 394 MobiDBLite consensus disorder prediction 62 79 - -
Cpe09g00347 394 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 SMART rav1_2 82 144 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 MobiDBLite consensus disorder prediction 1 79 - -
Cpe09g00347 394 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Cpe09g00347 394 Gene3D AP2/ERF domain 82 140 IPR036955 GO:0003700|GO:0006355
Cpe09g00347 394 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Cpe09g00347 394 ProSiteProfiles AP2/ERF domain profile. 82 138 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 6 359 - -
Cpe09g00347 394 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 359 - -
Cpe09g00347 394 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 CDD AP2 82 139 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Cpe09g00347 394 MobiDBLite consensus disorder prediction 1 29 - -
Cpe09g00347 394 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Cpe09g00347 394 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01302 Cpe09g00347 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00347 Cpe-Chr9:2099690 Cpe18g00584 Cpe-Chr18:6264092 1.25E-82 dispersed
Cpe01g01302 Cpe-Chr1:7828280 Cpe09g00347 Cpe-Chr9:2099690 3.64E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49983 PF00847 AP2 1.90E-11 CL0081 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00347 - - csv:101206349 483.411