Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00381 | ATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACGTATGGTGTGGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCTTTGAAGAAGATCCGCTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCTCTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTGCAAGATGTAGTGCATAGCGAGAAGCGCCTGTATCTTGTTTTCGAGTATCTGGATTTGGATTTGAAGAAGCACATGGACTCATCTCCTGAATTTGCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGCCATTCTCATAGAGTTCTTCATCGAGATTTAAAACCCCAAAATCTACTCATCGATCGTCGCACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACGCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACTCCTGTGGATGTTTGGTCTGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCACTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATTCATGGCCTGGCGTTACATCTTTGCCTGATTTCAAGTCTGCTTTCCCCAAGTGGCCTTCCAAGGACCTGGCTTCTGTAGTTCCAAATCTCGAATCTGCTGGCATTGATCTTCTCTCTTGTATAGTAAGTTACTATGATCTTAAATTGCGAGTGTTCGGCCCTAATAATCGAGTGATAAGAGTTCTGGGAACTCCAAATGAAGATTCATGGCCTGGCGTTACATCTTTGCCTGATTTCAAGTCTGCTTTCCCCAAGTGGCCTTCCAAGGACCTGGCTTCTGTAGTTCCAAATCTCGAATCTTCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCTCTCGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA | 1089 | 44.17 | MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDSWPGVTSLPDFKSAFPKWPSKDLASVVPNLESAGIDLLSCIVSYYDLKLRVFGPNNRVIRVLGTPNEDSWPGVTSLPDFKSAFPKWPSKDLASVVPNLESSGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2301648 | 2307844 | - | Cp4.1LG09g03870.1 | Cpe09g00381 | 474747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00381 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 276 | - | - | |
Cpe09g00381 | 362 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 84 | - | - | |
Cpe09g00381 | 362 | Pfam | Protein kinase domain | 4 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00381 | 362 | CDD | STKc_CDK1_CdkB_like | 4 | 355 | - | - | |
Cpe09g00381 | 362 | PANTHER | - | 283 | 359 | - | - | |
Cpe09g00381 | 362 | PANTHER | - | 3 | 269 | - | - | |
Cpe09g00381 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 358 | IPR011009 | - | |
Cpe09g00381 | 362 | ProSiteProfiles | Protein kinase domain profile. | 4 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00381 | 362 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Cpe09g00381 | 362 | PANTHER | CELL DIVISION PROTEIN KINASE | 283 | 359 | - | - | |
Cpe09g00381 | 362 | PANTHER | CELL DIVISION PROTEIN KINASE | 3 | 269 | - | - | |
Cpe09g00381 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 277 | 359 | - | - | |
Cpe09g00381 | 362 | SMART | serkin_6 | 4 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00381 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 269 | IPR011009 | - | |
Cpe09g00381 | 362 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00013 | Cpe-Chr2:91371 | Cpe09g00381 | Cpe-Chr9:2301648 | 2.72E-18 | dispersed | |
Cpe09g00381 | Cpe-Chr9:2301648 | Cpe19g00180 | Cpe-Chr19:1450012 | 2.18E-08 | dispersed | |
Cpe19g00664 | Cpe-Chr19:5308458 | Cpe09g00381 | Cpe-Chr9:2301648 | 9.70E-33 | dispersed | |
Cpe01g01276 | Cpe-Chr1:7675157 | Cpe09g00381 | Cpe-Chr9:2301648 | 1.42E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62597 | PF00069 | Pkinase | 1.90E-79 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00381 | K02206 | - | csv:116405161 | 526.554 |