Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00381 ATGGAGCAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACGTATGGTGTGGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCTTTGAAGAAGATCCGCTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCTCTGTTGAAGGAAATGCAGCATGGCAACATTGTAAGGTTGCAAGATGTAGTGCATAGCGAGAAGCGCCTGTATCTTGTTTTCGAGTATCTGGATTTGGATTTGAAGAAGCACATGGACTCATCTCCTGAATTTGCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTACCAAATTCTTCGTGGCATTGCATATTGCCATTCTCATAGAGTTCTTCATCGAGATTTAAAACCCCAAAATCTACTCATCGATCGTCGCACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACGCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACTCCTGTGGATGTTTGGTCTGTGGGTTGTATATTTGCTGAGATGGTTAACCAGCGGCCACTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATTCATGGCCTGGCGTTACATCTTTGCCTGATTTCAAGTCTGCTTTCCCCAAGTGGCCTTCCAAGGACCTGGCTTCTGTAGTTCCAAATCTCGAATCTGCTGGCATTGATCTTCTCTCTTGTATAGTAAGTTACTATGATCTTAAATTGCGAGTGTTCGGCCCTAATAATCGAGTGATAAGAGTTCTGGGAACTCCAAATGAAGATTCATGGCCTGGCGTTACATCTTTGCCTGATTTCAAGTCTGCTTTCCCCAAGTGGCCTTCCAAGGACCTGGCTTCTGTAGTTCCAAATCTCGAATCTTCTGGCATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCTCTCGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA 1089 44.17 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDSWPGVTSLPDFKSAFPKWPSKDLASVVPNLESAGIDLLSCIVSYYDLKLRVFGPNNRVIRVLGTPNEDSWPGVTSLPDFKSAFPKWPSKDLASVVPNLESSGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2301648 2307844 - Cp4.1LG09g03870.1 Cpe09g00381 474747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00381 362 Gene3D Transferase(Phosphotransferase) domain 1 86 276 - -
Cpe09g00381 362 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Cpe09g00381 362 Pfam Protein kinase domain 4 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00381 362 CDD STKc_CDK1_CdkB_like 4 355 - -
Cpe09g00381 362 PANTHER - 283 359 - -
Cpe09g00381 362 PANTHER - 3 269 - -
Cpe09g00381 362 SUPERFAMILY Protein kinase-like (PK-like) 282 358 IPR011009 -
Cpe09g00381 362 ProSiteProfiles Protein kinase domain profile. 4 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00381 362 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Cpe09g00381 362 PANTHER CELL DIVISION PROTEIN KINASE 283 359 - -
Cpe09g00381 362 PANTHER CELL DIVISION PROTEIN KINASE 3 269 - -
Cpe09g00381 362 Gene3D Transferase(Phosphotransferase) domain 1 277 359 - -
Cpe09g00381 362 SMART serkin_6 4 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00381 362 SUPERFAMILY Protein kinase-like (PK-like) 1 269 IPR011009 -
Cpe09g00381 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00013 Cpe-Chr2:91371 Cpe09g00381 Cpe-Chr9:2301648 2.72E-18 dispersed
Cpe09g00381 Cpe-Chr9:2301648 Cpe19g00180 Cpe-Chr19:1450012 2.18E-08 dispersed
Cpe19g00664 Cpe-Chr19:5308458 Cpe09g00381 Cpe-Chr9:2301648 9.70E-33 dispersed
Cpe01g01276 Cpe-Chr1:7675157 Cpe09g00381 Cpe-Chr9:2301648 1.42E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62597 PF00069 Pkinase 1.90E-79 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00381 K02206 - csv:116405161 526.554