Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00392 | ATGAATTGTCTTCAAAACCTTTCAATATCATCTTCTTTGCCGCTGCGAAGCTTCAAATGCCGGCAGAGAAAGCTTGAGTTCCAGCCCTGCAAACTGGTGATGAGGAACTTTACCGATCTACATCGACGTTCTTCCGTGAAGGCCGTATCTGGATCTACATCAAGTGTTGAAATAAGTGGCGCTGAAGTGGATGATGCCGAGGCAAAGGAGGAAAAAGAGGCAAAGGAGGAAAAAGAGGAAAAGGAGGAAAAGGAGGAAAAGTCTGAGATATACAGCCAGAACATGACAGAAGCTATGGGTGCTGTATTGACATATAGACATGAGCTGGGAATGAACTACAACTTCATTTGTCCGGATTTAATTGTAGGGTCATGCCTACAGACTCGAGAGGATGTTGACAAGCTCCGCAGCATTGGAGTTAAAACAATTTTCTGCTTGCAGCAAGATCCAGATTTAGAATATTTTGGGGTTGACATTGGTGCTATAATAGAGTATACAAGGACGTTTGATGATATCGAACATTTGCGAGCTCAAATAAGGGATTTTGATGCATTCGACCTACGGCTAAGATTACCAGCTGTCGTAAGCAAATTACATAAAGCGATAAACCAAAACGGTGGAGTGACTTATATACATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGCTGGCTTATATGTTCTGGGTTCGAGGCTACACGCTCAATGAGGCTTTAGAATTACTGCTGAGCAAACGACCATGCTTCCCAAAAATAGATGCTATTAAAAGTTCAACGGCTGATATTCTTTCGGGATTTAAAAAGAAGCCCATCACTTTATCGTGGGAAGATGACCAATGCTCAATTGTAGAGGTATCTGGACTTGATATTGGATGGGGTCAGAGGGTTCTATTAAAATTCGACAAGGAACGAGGTGTATGGATTCTCAACAAGGAACTGGCGGAAGGACTATATGAATACAAATATATCATTGATGGTCAATGGAGGTGCAACGAAACCGAGCCCGTCACTCCACCCAACAAAGATGGCCACGTCAACAATTTCATTCAAGTTGATGGTGATGATGATCCAAGTAGTGAGAGAGCTATTGTCCGAGGAAGGTTAACTGGAGACGACCCAGAACTCACGAATGAAGAAAGAGGCAAAATAAGGCAATTTCTTGAAGCTTGCCCGAATGAAAATTGA | 1188 | 42.93 | MNCLQNLSISSSLPLRSFKCRQRKLEFQPCKLVMRNFTDLHRRSSVKAVSGSTSSVEISGAEVDDAEAKEEKEAKEEKEEKEEKEEKSEIYSQNMTEAMGAVLTYRHELGMNYNFICPDLIVGSCLQTREDVDKLRSIGVKTIFCLQQDPDLEYFGVDIGAIIEYTRTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAINQNGGVTYIHCTAGLGRAPAVALAYMFWVRGYTLNEALELLLSKRPCFPKIDAIKSSTADILSGFKKKPITLSWEDDQCSIVEVSGLDIGWGQRVLLKFDKERGVWILNKELAEGLYEYKYIIDGQWRCNETEPVTPPNKDGHVNNFIQVDGDDDPSSERAIVRGRLTGDDPELTNEERGKIRQFLEACPNEN | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2415875 | 2422977 | + | Cp4.1LG09g03900.1 | Cpe09g00392 | 474758 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00392 | 395 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 109 | 253 | IPR029021 | - | |
Cpe09g00392 | 395 | MobiDBLite | consensus disorder prediction | 62 | 89 | - | - | |
Cpe09g00392 | 395 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 271 | 355 | IPR032640 | - | |
Cpe09g00392 | 395 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC | 1 | 394 | IPR030079 | GO:0005982|GO:0007623|GO:0019203 | |
Cpe09g00392 | 395 | Coils | Coil | 58 | 94 | - | - | |
Cpe09g00392 | 395 | MobiDBLite | consensus disorder prediction | 57 | 89 | - | - | |
Cpe09g00392 | 395 | CDD | E_set_AMPKbeta_like_N | 271 | 352 | - | - | |
Cpe09g00392 | 395 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 189 | 248 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe09g00392 | 395 | Gene3D | Immunoglobulins | 267 | 359 | IPR013783 | - | |
Cpe09g00392 | 395 | Pfam | Dual specificity phosphatase, catalytic domain | 164 | 250 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe09g00392 | 395 | SUPERFAMILY | E set domains | 270 | 353 | IPR014756 | - | |
Cpe09g00392 | 395 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 112 | 269 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe09g00392 | 395 | Gene3D | Protein tyrosine phosphatase superfamily | 105 | 387 | IPR029021 | - | |
Cpe09g00392 | 395 | CDD | DSP_laforin-like | 111 | 258 | IPR045204 | GO:0019203|GO:0046838 | |
Cpe09g00392 | 395 | SMART | dsp_5 | 112 | 258 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe09g00392 | 395 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 1 | 394 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00550 | Cpe-Chr4:5925648 | Cpe09g00392 | Cpe-Chr9:2415875 | 4.27E-30 | dispersed | |
Cpe09g00392 | Cpe-Chr9:2415875 | Cpe11g01148 | Cpe-Chr11:9491701 | 1.13E-06 | dispersed | |
Cpe01g01265 | Cpe-Chr1:7587491 | Cpe09g00392 | Cpe-Chr9:2415875 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00392 | - | - | cpep:111802109 | 761.525 |