Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00420 ATGGCGAAAGACGACGTGTCGGCGCGGGGGTTCTCCGGCAAGGACTACCAGGACCCTCCACCTGCGCCGCTGTTCGACGCGGCGGAGGTAGGGAAGTGGTCGTTTTTCAGAGCCCTGATTGCTGAGTTTGTCGCCACTCTCCTGTTTCTGTATATCACTATCTTGATTATTATTGGCTATAGTAGCCAGTCCGACCCCCACAAACTTGGCGGCAACGCTTGCGGCGGCGTTGGCATCCTCGGTATCGCTTGGGGCTTTGGCGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGCATTTCAGGCGGGCACATCAACCCGGCGGTGACATTCGGGCTATTCTTAGCCCGGAAGGTGTCGCTGGTTCGAGCAGTGGCGTACATGATAGCTCAGTGCTTGGGGGCCATATGCGGAACGGGGCTGGTGAAAGCCTTACAAAGGGACTACTTCAACAGGTACGGTGGCGGTGCGAACCAGCTCGCCCACGGCTACAGCAAAGGCGCCGGCTTGGGGGCAGAAATCATCGGTACCTTCATCTTGGTCTACACCGTCTTCTCCGCCACCGACGCCAAGAGAAACGCCAGAGACTCCCATGTTCCTGTATTGGCTCCGCTCTCGATTGGGTTCGCCGTGTTCATGGTTCACTTAGCCACCATTCCCATTACTGGCACCAGCATCAACCCGGCTAGAAGCTTCGGCCCCGCTGTCATCTTGAACCGGGAAAAACCTTGGGATGATCATTGGATGTTCTGGGTTGGGCCTTTCATCGGAGCCGCCATTGCAGCGCTCTACCACCAGTTCGTTTTGCGGGCCGGCGCGGCGCCTGCGATTCTCCACATCGTTATTCATCTAATTCGAGCAAAGATGCATCTGTGGCCATCGACGAGGATCAGAGACTCTTTCAAGAGTGCTTATATCCAAAATCTGGAATGGAACTTCCACAGAATGAAAATCCAGAAGCAGCAGCAGCAGCAGCAATCTTCGAGCAAACAGAACTTGTTGGATAAACAACAATCTTCTGATGCCGATGGCGAAACTTCAGGCAAATCCAGTTCAGTTTCTTTTGGTCATCGAGTTCTTGAATTCTGCTCTGAAGTTCTCCTGCTTCTCTCCTGTTGTTATTGCTGCTATTGCTGTGGAGTATCTGTACTGGAGCCTCGTCATGAA 1167 53.98 MAKDDVSARGFSGKDYQDPPPAPLFDAAEVGKWSFFRALIAEFVATLLFLYITILIIIGYSSQSDPHKLGGNACGGVGILGIAWGFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVAYMIAQCLGAICGTGLVKALQRDYFNRYGGGANQLAHGYSKGAGLGAEIIGTFILVYTVFSATDAKRNARDSHVPVLAPLSIGFAVFMVHLATIPITGTSINPARSFGPAVILNREKPWDDHWMFWVGPFIGAAIAALYHQFVLRAGAAPAILHIVIHLIRAKMHLWPSTRIRDSFKSAYIQNLEWNFHRMKIQKQQQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLEPRHE 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2660647 2665887 + Cp4.1LG09g04160.1 Cpe09g00420 474786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00420 389 Pfam Major intrinsic protein 31 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 9 276 IPR034294 -
Cpe09g00420 389 TIGRFAM MIP: MIP family channel proteins 41 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PANTHER AQUAPORIN PIP2-4-RELATED 9 276 - -
Cpe09g00420 389 CDD MIP 37 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 MobiDBLite consensus disorder prediction 324 352 - -
Cpe09g00420 389 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Cpe09g00420 389 SUPERFAMILY Aquaporin-like 30 271 IPR023271 -
Cpe09g00420 389 Gene3D Glycerol uptake facilitator protein. 22 276 IPR023271 -
Cpe09g00420 389 Coils Coil 306 326 - -
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g00420 389 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02241 Cpe09g00420 CCT
Cpe01g02241 Cpe09g00420 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00420 Cpe-Chr9:2660647 Cpe10g00216 Cpe-Chr10:1223766 1.73E-134 dispersed
Cpe19g00410 Cpe-Chr19:3623233 Cpe09g00420 Cpe-Chr9:2660647 3.69E-140 dispersed
Cpe01g02241 Cpe-Chr1:19049402 Cpe09g00420 Cpe-Chr9:2660647 5.56E-153 wgd
Cpe01g01236 Cpe-Chr1:7408243 Cpe09g00420 Cpe-Chr9:2660647 1.51E-149 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe09g00420 Cpe-Chr9:2660647 8.41E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00420 K09872 - csv:101204956 499.204