Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00427 ATGGAAGAAAAGAGTTCTAATTGTAACGACCAACGACATGAAAACCAACCAATCGCTTATAGTTATGGGATCGTGTCAATGGCGGAGCGAAAAGATGGTCAAATTCGCTTTCTGGAAATGGGGAAGAAAGGGGGTTGGTTTGCTGCAGTGAGGAAGGTTCTCAGTAACAAGATACAAGAAAGATCCAAGAAAAAATGGTTCCAAAGGGAGGAGAGTGTGGACACATTTGTGGAACCATCCCTGTTAGATGTTCCCGCAGAACCTCCTCCTATGGAAGATGATATCAATCAAACTAAGCCAGAGGATGAACCGAGCGAGCTTCCGCATTCCGAGGCGGTGGAGCCTGCTGTTGATGAAGCTCAGCTGGCTGTGGAGGATGAACATCTACCCAGTATTGTACCCTGTAAGCCAGAAATGACTGAGGAAACAGGAGCTATTATTATTCAATCAGCCTTTCGTGGATATAAGGCGAGGAAAGTATCAAGGGGTCTCAAAGCGATAATGAGATTGAGGTCGTTGGTACAAGGCCACTCTGTGAAACGGCAGGTGGCCTCTACTTTAAAAAGTATGCAAACTCTTGCACATGTACAGTCAGAGGTTCGTGCAAGGAGAGTAAGAATGTCTGAAGAAAATCAGGATTTCCAACGGCAACTTTGTAACAAACGTGAGAAAGATCATGAGAAATTCAGAACTTCTCGAACATGGAAGAGTTCTTCAAAAACTACAACCCATTCTGTCATGGATTCAAACAATCCCTACTGGGGCTGGAGTTGGTTGGAGAGATGGATGGCAGCTCGCCCATGGGAACTCCAAAGCACAGCCGATCACCCAGATCACATTTCTGTCACAAACGTCCCAACTCATGCATCTACAATCGACATAATCCAAGTTTATGCTCGTCGCGATCCGAACCCCCCTACGAAGCCTTCTCCAAGGACTCCTACTAGCCAAAAGCCAAGCCAAGTGCATAGGCATCAGTCACCTTCCATTCCTAGAGCATTATCTTCATCATCTAGCAAAAAGAAAACAAATGTAGCCAACTTAAAGGTAGGCAGCTGGAGTGGGGATGATGACATGAGAAGCCCCGTGAGTGTCAACTCAAAGCTCACCCGGAGGCACAGTATAGGAGGGTCATCATTCAGGGATGACATAAGCATTGCCAGTTTACCTTCAGTTTCGAGTTACACGCCAACGTCGAAGACAGCTGCTAAGGCTCGGTCCCGGTTTGCGAGTCCATCTGTGACACTGAAGAAAGAGGCAATGGAAAAAGGATCTGCAAGCACAGGTTCTGCAAAGAAGCGGCTCTCCATTACAGGTTCCCCTGCTAAACCAAGGAGGCTATCAAGTCCTCCCATTGTGAATAGTAGCCAAGTACATTAA 1380 46.52 MEEKSSNCNDQRHENQPIAYSYGIVSMAERKDGQIRFLEMGKKGGWFAAVRKVLSNKIQERSKKKWFQREESVDTFVEPSLLDVPAEPPPMEDDINQTKPEDEPSELPHSEAVEPAVDEAQLAVEDEHLPSIVPCKPEMTEETGAIIIQSAFRGYKARKVSRGLKAIMRLRSLVQGHSVKRQVASTLKSMQTLAHVQSEVRARRVRMSEENQDFQRQLCNKREKDHEKFRTSRTWKSSSKTTTHSVMDSNNPYWGWSWLERWMAARPWELQSTADHPDHISVTNVPTHASTIDIIQVYARRDPNPPTKPSPRTPTSQKPSQVHRHQSPSIPRALSSSSSKKKTNVANLKVGSWSGDDDMRSPVSVNSKLTRRHSIGGSSFRDDISIASLPSVSSYTPTSKTAAKARSRFASPSVTLKKEAMEKGSASTGSAKKRLSITGSPAKPRRLSSPPIVNSSQVH 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2720724 2725136 + Cp4.1LG09g04270.1 Cpe09g00427 474793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00427 459 MobiDBLite consensus disorder prediction 94 111 - -
Cpe09g00427 459 MobiDBLite consensus disorder prediction 314 350 - -
Cpe09g00427 459 MobiDBLite consensus disorder prediction 225 246 - -
Cpe09g00427 459 MobiDBLite consensus disorder prediction 359 374 - -
Cpe09g00427 459 PANTHER IQ-DOMAIN 5-RELATED 242 456 - -
Cpe09g00427 459 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 40 238 - -
Cpe09g00427 459 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
Cpe09g00427 459 MobiDBLite consensus disorder prediction 81 111 - -
Cpe09g00427 459 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 242 456 - -
Cpe09g00427 459 MobiDBLite consensus disorder prediction 384 408 - -
Cpe09g00427 459 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Cpe09g00427 459 MobiDBLite consensus disorder prediction 300 459 - -
Cpe09g00427 459 PANTHER IQ-DOMAIN 5-RELATED 40 238 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01224 Cpe09g00427 CCT
Cpe01g02257 Cpe09g00427 CCT
Cpe01g01224 Cpe09g00427 ECH
Cpe01g02257 Cpe09g00427 ECH
Cpe09g00427 Cpe13g00819 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00427 Cpe-Chr9:2720724 Cpe13g00819 Cpe-Chr13:7295985 9.40E-100 dispersed
Cpe01g02257 Cpe-Chr1:19147453 Cpe09g00427 Cpe-Chr9:2720724 3.21E-104 wgd
Cpe01g01224 Cpe-Chr1:7309625 Cpe09g00427 Cpe-Chr9:2720724 2.63E-114 wgd
Cpe10g00203 Cpe-Chr10:1176206 Cpe09g00427 Cpe-Chr9:2720724 1.69E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00427 - - cmax:111466344 754.977