Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00455 ATGGCTGATGGCAGTCCAGGGACCGACATCTCTACAGACGTCGACACAGATGACAAAAACCAGAGGCTTGATATGGTTCTGCTTAATGCTGCTGTGGCTTCTGATTCAAGTGATAGAACAAAAGACAAGTCTGATCAGAAGACTCTACGTAGGCTTGCGCAGAATCGTGAAGCTGCCCGAAAAAGTCGACTGCGGAAAAAGGCATATGTCCAACAGCTCGAGAGTAGTCGTTTAAAGTTGACCCAACTCGAGCAGGAGCTTCAACGAGCACGGCAGCAGGGAATCTTCATATCAAGCTCTGGAGATCAGGCTCATTCTATGGCTGGAAATGGAGCCATGGCGTTCGATGTGGAATACGCCCGTTGGTTGGAAGACCAAAACAAGCAGATCAATGAACTGAGAGCAGCCGTAAACTCTCATGCAAGCGATACCGAACTTCGAATGGTTGTCGATGGCATCTTGCTTCACTACGACGAGTTTTTTCAGTTAAAAGGCGTCGCTGCAAAGGCTGATGTTTTTCACTTGTTGTCTGGCATGTGGAAAACACCAGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCAGAGCTCCTAAAGGCCAGCCGTTATGGCCAATTAAGCAAACCACGAGCAATTCGTCTGGGTAGATGTGTGGGACAGAGGGCTCGTGGTACTAGCTGCCCTTGCCCTTTCTCCTCCGCTTTGGGAACCACGAGCAATTGGTCTGAAAGATGTGTGGGATTGAGGACTCGTGAGCCGCTCACAGAACAGCAATTGTTGGGCATATCAAACTTGCAGCAGTCTTCACAACAAACTGAAGATGCATTGTCACAAGGCATGGAAGCGTTGCAGCAATCATTGGCTGAGACATTGTCCAGTGGATCTCTTGGCTCTTCGAATGCGTCTGGCAATGTGGCTAACTACATGGGCCAAATGGCCACGGCCATGGGGAAACTTGGGACTCTTGAGGGGTTTATTCACCAGCTCGTGCTCTTCTTGCAATCCATGATTACTTCTCTAGACTACGAGCCCTTAGTTCCCTGTGGCTTGCTCGTCCAAAAGAGTGAATGA 1077 48.93 MADGSPGTDISTDVDTDDKNQRLDMVLLNAAVASDSSDRTKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMAGNGAMAFDVEYARWLEDQNKQINELRAAVNSHASDTELRMVVDGILLHYDEFFQLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKASRYGQLSKPRAIRLGRCVGQRARGTSCPCPFSSALGTTSNWSERCVGLRTREPLTEQQLLGISNLQQSSQQTEDALSQGMEALQQSLAETLSSGSLGSSNASGNVANYMGQMATAMGKLGTLEGFIHQLVLFLQSMITSLDYEPLVPCGLLVQKSE 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2944075 2952734 + Cp4.1LG09g04520.1 Cpe09g00455 474821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00455 358 PANTHER TRANSCRIPTION FACTOR TGA9 254 331 - -
Cpe09g00455 358 Pfam Seed dormancy control 129 201 IPR025422 GO:0006351|GO:0043565
Cpe09g00455 358 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Cpe09g00455 358 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 202 - -
Cpe09g00455 358 CDD bZIP_HBP1b-like 47 99 - -
Cpe09g00455 358 PANTHER TRANSCRIPTION FACTOR TGA9 1 202 - -
Cpe09g00455 358 Coils Coil 123 143 - -
Cpe09g00455 358 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Cpe09g00455 358 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Cpe09g00455 358 ProSiteProfiles DOG1 domain profile. 112 358 IPR025422 GO:0006351|GO:0043565
Cpe09g00455 358 Coils Coil 66 93 - -
Cpe09g00455 358 MobiDBLite consensus disorder prediction 1 21 - -
Cpe09g00455 358 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Cpe09g00455 358 Gene3D - 46 98 - -
Cpe09g00455 358 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Cpe09g00455 358 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 254 331 - -
Cpe09g00455 358 MobiDBLite consensus disorder prediction 30 49 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01198 Cpe09g00455 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00455 Cpe-Chr9:2944075 Cpe13g00411 Cpe-Chr13:4453535 9.61E-96 dispersed
Cpe01g01198 Cpe-Chr1:7130946 Cpe09g00455 Cpe-Chr9:2944075 8.10E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49998 PF14144 DOG1 5.10E-30 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00455 K14431 - csv:101216885 451.44