Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00458 ATGGATCAGTTTCCCAAAGAATTCGACAGAGAAGTATGGAACATGAACAAGATTGAACGAGAAGAGGAAGAGGAAGAAGACGATGAGGAGGAGGAAGAAGATGTACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGAAGGTGAAGAAGGATTTGACTCGAGTTTTCTGTGTTTGTTCTGCACATCGAAGTATAATGACTGCGCCACGCTGTTCAACCACTGCAACTCGGTCCATAATTTTGATTTTCACGGCATTAGGAAGGGTCTGGGTTTAGACTTTTATGGTTCGTTTAAAATTATCAACTACATACGATCTCAGGTAGCAGAAAATAGGTGTTGGAGCTGTGGTTTCTTGTGTCAATCAAGCCAAGATTTACAGAACCATTTGCACAAAACACTCAATCTCAATGAAATCAAGGCTCTTTGGAATGATGATAAATACCTGAAACCCTTCAGTGAAGATGATCCCCTCTTGTACAGTTTTGCAGAAGCTGAAGAGGATGATGATATTTCACCTATCACCAACAATCATCAGAGGAATACAGATACCAATGGAGGTAATTGCAATACTGATGAAATTAATAGAGCAAGTCTTCCATTTCATCTTAACCGAAGCAATGAAAATGAAATGGCAGATTGTAGTTCTACTTCACATGGTTATTTGAATACTCCAAGTAACTTAGAGGTCGTGATTGAGAATACCGTGAAAGCCACGGAGACCTTGGAATTGAACGATAAGACGCAGGAAGACGATCGATTAAAAATAACCAGAAGAAATTTCTATTCGAAGGATATCAAGAATGTAAATGAAAGCTACTTTGGTTCATATAGCTCTTTTGGCATACACAGAGAGATGTTAAGTGACAAGGTCAGAATGGATGCTTATATGCAAGCTATTTTGCAAAACCCATCTCTCTTCCACAATGCAGCTGTGATGGATGTGGGCTGTGGAACAGGCATACTTAGTCTCTTTGCTGCAAAAGCCGGTGCATCAAGAGTTATTGCAGTTGAAGCAAGTGAAAAGATGGCAGCAGTGGCTACTCAAATTGCAAAAGATAACGGTCTCTTGCGGAATAGGAAACAGACTGGGGATTGTGGCATGTCAAGTGGGACTGTTGAAGTGGTTAATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAACCTCACAGTGTTGACGTATTATTGAGTGAATGGATGGGCTATTGCTTGTTGTATGAGTCAATGCTCAGCTCAGTGCTCTTTGCAAGGGATCGTTGGTTGAAGCCTGGAGGTGCCATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAGATGTGTACGGTTTCAATATGTCTTGTGTAGGGAAGGAACTTGTAGAGGATGCTGCCAAAGGTCCCATCGTTGACACTGTGGAGGCTAACGATTTAGTTACTAGTGCAGCAATACTTCATACTTTTGATCTAGCAACTATGCATGCTGACGAAGTAGACTTCACTGCAAGTACAGAGTTGGAACCAAATTTGCATAATCCTTCAAGCAAATCAGAAAACGGTGAAACTGAAACATCTTGGTGTCATGGAGTTGTCTTATGGTTTGAAACTGGTTTTACAAGCAGATTTTGCAAAGAATCACCGGCTGTTCTATCTACATCCCCATACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCAGAGAACCAATTGCTATAACATCTAGCAAATCTGCCACCAACAAATCAGCAGCAGTGGGCAGCTTTGCCTCCCCCGCTGTCAAAGTTCATTTGCGCCTTAGCATCGTCCGTGCGCCTGAACATCGAAGCATTGACATTTCACTCGAGACTACTGGGATTGCCAGTGATGGTAGGAAGCACCACTGGCCCGTACAACTTTTCACACTAAGATAA 1938 42.0 MDQFPKEFDREVWNMNKIEREEEEEEDDEEEEEDVQDDWDDWNADEEEGEEGFDSSFLCLFCTSKYNDCATLFNHCNSVHNFDFHGIRKGLGLDFYGSFKIINYIRSQVAENRCWSCGFLCQSSQDLQNHLHKTLNLNEIKALWNDDKYLKPFSEDDPLLYSFAEAEEDDDISPITNNHQRNTDTNGGNCNTDEINRASLPFHLNRSNENEMADCSSTSHGYLNTPSNLEVVIENTVKATETLELNDKTQEDDRLKITRRNFYSKDIKNVNESYFGSYSSFGIHREMLSDKVRMDAYMQAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVIAVEASEKMAAVATQIAKDNGLLRNRKQTGDCGMSSGTVEVVNGMVEELDKNIEIQPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWEDVYGFNMSCVGKELVEDAAKGPIVDTVEANDLVTSAAILHTFDLATMHADEVDFTASTELEPNLHNPSSKSENGETETSWCHGVVLWFETGFTSRFCKESPAVLSTSPYTPKTHWSQTILTFREPIAITSSKSATNKSAAVGSFASPAVKVHLRLSIVRAPEHRSIDISLETTGIASDGRKHHWPVQLFTLR 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2984775 2988801 + Cp4.1LG09g04510.1 Cpe09g00458 474824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00458 645 MobiDBLite consensus disorder prediction 1 40 - -
Cpe09g00458 645 MobiDBLite consensus disorder prediction 176 192 - -
Cpe09g00458 645 ProSitePatterns Zinc finger C2H2 type domain signature. 59 80 IPR013087 -
Cpe09g00458 645 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 271 605 IPR025799 GO:0016274|GO:0018216
Cpe09g00458 645 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 27 643 - -
Cpe09g00458 645 CDD AdoMet_MTases 313 431 - -
Cpe09g00458 645 Pfam Methyltransferase domain 313 428 IPR041698 -
Cpe09g00458 645 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 27 643 IPR025799 GO:0016274|GO:0018216
Cpe09g00458 645 MobiDBLite consensus disorder prediction 1 19 - -
Cpe09g00458 645 SUPERFAMILY beta-beta-alpha zinc fingers 37 171 IPR036236 -
Cpe09g00458 645 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 277 584 IPR029063 -
Cpe09g00458 645 MobiDBLite consensus disorder prediction 172 192 - -
Cpe09g00458 645 Gene3D Vaccinia Virus protein VP39 262 432 IPR029063 -
Cpe09g00458 645 Gene3D - 435 639 - -
Cpe09g00458 645 Coils Coil 15 38 - -
Cpe09g00458 645 Pfam C2H2 type zinc-finger (2 copies) 59 133 IPR041661 -
Cpe09g00458 645 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01068 Cpe-Chr4:9386123 Cpe09g00458 Cpe-Chr9:2984775 1.39E-65 dispersed
Cpe09g00458 Cpe-Chr9:2984775 Cpe18g00373 Cpe-Chr18:5066541 1.27E-64 dispersed
Cpe01g01195 Cpe-Chr1:7119928 Cpe09g00458 Cpe-Chr9:2984775 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00458 K11436 - csv:101215999 954.896