Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe09g00479 | ATGGGAAAGCTAAGCTTGAGCTGTTGGAGTAGCTTTGTTGAGAATTCAAAGCCTTACTTTGCCATGATGTCCTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTTAGTAGAGGGATGAGCCATTACGTTCTCGTCGTATATCGACACGCTTTCGCTACCGCTTCTATTGCTCCCTTCGCTTTCTTCTTCGAACGCCCCGTTATCGATCAAAACTTCTATTATGCTGGATTGAAATACACTTCACCAACTTTCTCGTGTGCCATGAGCAACATGCTGCCTGCAATGACATTCGTGATGGCTGTGATCTTCAGGATGGAAAAATTAGAGATGAAGAAGCTGAGATGCCAAGCCAAGTTCTTGGGAACTTTAGTGACAGTGATAGGAGCTATGCTGATGACATTATACAAAGGCCCACTGATTCAAATGGCTTGGTCTAAACACTCTCATGTTCCCACAAGTTCTAATGATCAAGCTTCTGCCAATAAAGATTGGTTCAAAGGCTCAATTTTCCTCATTATTGCCACTCTTGCTTGGTCTTCTCTTTTCGTCTTGCAGAATCAAGCATTGAAGACATACATGAACCACCAGCTAACCCTCACCACACTAGTATGCTTTATGGGGACTTTACAAGCCATAGCTGTGACTGTAGTAGCCGAACACAAAGCTTCTGTTTGGAGAATTGGTTGGGACATGAACCTCCTTGCTGCCGCCTACGCCGTAAGCTCCCGAACCGCTCTCACAAACCCGACTAATCTTTATCGTCACAATAATATGATATCGAACCAATACGAGAATTTCATATTTAACGTAAAGGGAATTGTGACGTCAAGTATTTCATATTATGTACAAGGGTTGGTGATGAAGAAGAGAGGACCTGTTTTTGCAACAGCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCTTTCATCCTATCTGAAAAAATTTACCTTGGAGGGTAA | 984 | 42.58 | MGKLSLSCWSSFVENSKPYFAMMSLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFAFFFERPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKFLGTLVTVIGAMLMTLYKGPLIQMAWSKHSHVPTSSNDQASANKDWFKGSIFLIIATLAWSSLFVLQNQALKTYMNHQLTLTTLVCFMGTLQAIAVTVVAEHKASVWRIGWDMNLLAAAYAVSSRTALTNPTNLYRHNNMISNQYENFIFNVKGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILSEKIYLGG | 327 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3157687 | 3160572 | - | Cp4.1LG09g04810.1 | Cpe09g00479 | 474845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 276 | 327 | IPR030184 | GO:0016021|GO:0022857 | |
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 71 | 244 | IPR030184 | GO:0016021|GO:0022857 | |
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 12 | 69 | IPR030184 | GO:0016021|GO:0022857 | |
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 71 | 244 | - | - | |
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 12 | 69 | - | - | |
| Cpe09g00479 | 327 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 52 | 141 | - | - | |
| Cpe09g00479 | 327 | PANTHER | WAT1-RELATED PROTEIN | 276 | 327 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe08g01338 | Cpe-Chr8:9650478 | Cpe09g00479 | Cpe-Chr9:3157687 | 9.85E-132 | dispersed | |
| Cpe09g00479 | Cpe-Chr9:3157687 | Cpe10g00870 | Cpe-Chr10:4902433 | 5.79E-91 | dispersed | |
| Cpe01g01186 | Cpe-Chr1:7055958 | Cpe09g00479 | Cpe-Chr9:3157687 | 9.77E-27 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe09g00479 | - | - | csv:101206648 | 482.641 |