Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00494 ATGGCTTCTAGGAACATGTCTCGAAAATCCCAGGGGATGATTTCATTACAATCCATTAAATCCATGCCAGCTAATTCTCGGTTCATGATTCCGCAAGAAGCTGAAGCTTTGGAAGAGCCTTATAATCGGAATGTGAAAAACATGGAAGCTAGTTCGTTAGTTGATGGCGAAAATGGTGCTTCTGGAGTTGATCGACTTCGATCCAGTACGAACAATAGTGACGTGCTGAATGAGGATTCACCGTATAATTTCAATATTAAAACAGTGGAAGAAAGACCCGCGCTGGAAGATGGAGAAGATGGTTCTATGTCTTTACCTTCACCTTCAAATTCGGCTTCACATAGTGAAAGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATGCATCAATCTTGGTTTAAACTTCCAAATGGCGATTGGGATCTTGTAAATATACTGTCAACTACAGGAACAGAATCAGTAGTTTCACTGACTGAAGGAAAGGTGTTAAAGGTGAAAGCTGAAAATTTAATTTCTGCAAATCCAGATATCCTTGATGGCGTTGATGATCTTATGCAACTTAGCTATCTAAATGAACCTTCAGTGTTGTATGATCTTGAGTACAGATATAATCAGGATCTTATATATACAAAAGCAGGGCCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGACTTGTATGGAAGTGATTACATTGAAGCATACAAGCGCAAAACGGCTCAGAGCCCGCATGTTTATGCCATTACAGATACAGCCATCAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTGTAATAAGCGGTGAAAGTGGAGCTGGAAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCAGCCCTTGGCGGTGGAAGTGGAATAGAGTTTGAGATATTGAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACTTCGAGAAATGATAACTCAAGCCGCTTCGGAAAATTGATTGAAATCCATTTTAGTGAAACTGGGAGAATCACTGGTGCAAATATTCAAACTTGTAAGCTTTCTTGTATTTAG 1062 39.55 MASRNMSRKSQGMISLQSIKSMPANSRFMIPQEAEALEEPYNRNVKNMEASSLVDGENGASGVDRLRSSTNNSDVLNEDSPYNFNIKTVEERPALEDGEDGSMSLPSPSNSASHSESRWGDTSSYTPRKMHQSWFKLPNGDWDLVNILSTTGTESVVSLTEGKVLKVKAENLISANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDLIYTKAGPVLVAINPFKKVDLYGSDYIEAYKRKTAQSPHVYAITDTAIREMIRDEVNQSIVISGESGAGKTETAKIAMQYLAALGGGSGIEFEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGRITGANIQTCKLSCI 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3270166 3284451 - Cp4.1LG09g04920.1 Cpe09g00494 474860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00494 353 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 PRINTS Myosin heavy chain signature 211 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 PRINTS Myosin heavy chain signature 265 290 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 SMART MYSc_2a 175 352 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 Pfam Myosin head (motor domain) 183 347 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 Gene3D Kinesin motor domain 133 352 IPR036961 -
Cpe09g00494 353 MobiDBLite consensus disorder prediction 96 124 - -
Cpe09g00494 353 ProSiteProfiles Myosin motor domain profile. 181 353 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe09g00494 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 350 IPR027417 -
Cpe09g00494 353 MobiDBLite consensus disorder prediction 49 80 - -
Cpe09g00494 353 MobiDBLite consensus disorder prediction 63 80 - -
Cpe09g00494 353 PANTHER MYOSIN 17 351 - -
Cpe09g00494 353 MobiDBLite consensus disorder prediction 103 124 - -
Cpe09g00494 353 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 17 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00494 Cpe-Chr9:3270166 Cpe06g00718 Cpe-Chr6:4471672 6.93E-60 dispersed
Cpe01g01154 Cpe-Chr1:6860892 Cpe09g00494 Cpe-Chr9:3270166 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00494 - K10357 csv:101222101 577.4