Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00495 ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACGCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCAATTATTGCTGCCACCGGCACCGGCACCACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGCCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTTGGCAAACGTGTCAGAGCCGACGATGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAATCGTCGGCCGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACCGTCGTTGA 693 59.6 MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASLSSTTSTLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGISQPASLFAQQQQPIRESSAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3289850 3290542 - Cp4.1LG09g04990.1 Cpe09g00495 474861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00495 230 MobiDBLite consensus disorder prediction 32 47 - -
Cpe09g00495 230 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 226 IPR005333 GO:0003700
Cpe09g00495 230 Coils Coil 225 230 - -
Cpe09g00495 230 MobiDBLite consensus disorder prediction 1 47 - -
Cpe09g00495 230 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
Cpe09g00495 230 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 1 226 - -
Cpe09g00495 230 MobiDBLite consensus disorder prediction 1 28 - -
Cpe09g00495 230 Pfam TCP family transcription factor 35 123 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01952 Cpe-Chr1:16621055 Cpe09g00495 Cpe-Chr9:3289850 5.99E-21 dispersed
Cpe09g00495 Cpe-Chr9:3289850 Cpe20g00029 Cpe-Chr20:145294 1.64E-42 dispersed
Cpe13g00517 Cpe-Chr13:5277063 Cpe09g00495 Cpe-Chr9:3289850 4.86E-56 transposed
Cpe01g01152 Cpe-Chr1:6847350 Cpe09g00495 Cpe-Chr9:3289850 3.63E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50002 PF03634 TCP 1.30E-33 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00495 K16221 - csv:101206050 314.694