Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00505 ATGTCTTCTTCAAACGATACTTCTATTTCTTCATCACATTCTGATTTGGATTCTTCTCCTCCTCCTTCGCCGCAGTCAGATGGTTTATCGTTGATGTCGAATGAAGATGTTTCTGAATCGCCTATTGTTTCATCGAAAATTAAATCTCCGCCTGCCGACGACGGAGGTTCACCGTCTTCCACACCGAAACCAAACGTTGGATCTTCAACGCCGCCCCCGATTGATTCCTCTAATTCAGGTTCATCCAAAGAGAATCCATCGCCACCTCCTGTACCTTCCGCTTCCGCTTCCCCACCGCCATCTCCTACTTTTCCTCCTCCTTCTCCTCTTTTGATACCTTCGCCACCGCCACCACAACTGCCGTCTGAGAGCGGCAGTGATAATCCTCCACCTTCCTCTGTTCCAACAAAAGGCTCTCCGGCATCTCCAGGAAATCCATCTTCTCCAATACCGGGGAATAATCCCTCTACTCCGACGAATAACGGTGCAGCTTCGGGTTCTAATACAGCCAAGGAGCTTCCACCATCTGAATCGACCGATTCTCCTCCTCAATCAGAAAATACAGTCGTGATTCCTTCACCAGGTGCAAATCCGGCGAGGGGGAAACGAAATCCGAGTCCACCTCAAGAGGCGACTTCTCCCACATCAGACTCTAACATCTTTCAACCTCCCTCAACACCATCCACATCCAATAGTACTCTAGACAACTTACCTCAGTCCTCCGACTCAACGCCGGTGGAAACTCCATTAAGGCAATCCAATGCACCATCGTCACCTTCAAGTAGTCAAACAAAAGTTGCAGTAGGCGTTGTAGTAGTTGGAGTTATTGTAATTGTTATGGTTGCCGTAATTTTTATATTCACAAGGAAGAAGAAAAGACGGGGAGACTTGGAGAGTGGCCCATACTTGCCTCCTAACAACGTCTGTGAGAAATCAGATGGAAATTACAATCCGGATCAACATAGTGGGAACTCTGGCTCGGCAGAAGGCATCTATACCCAGGTCCCGCATACTCCTGTTGGAAATAGCTTTGGGAGTCAAAAAGGAACAGGAGACAGAGGCAGTGGAGTGGATTCAGGTGTGATAAACAGTGCTAAGTTCTTTAGCTATGAGGAGTTGATGGAGATTACCTCTGGATTTTCGCGTCAAAACGTTCTTGGGGAAGGTGGGTTTGGATGTGTTTACCAGGGTTTGCTTCCAGATGGGAAGCCAGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGGCAGGGGGAAAAGGAATTCAAAGCGGAGGTTGAGATTATCAGTCGCGTTCATCATCGGCATTTGGTGTCTTTAGTGGGCTACTGCGGCTCTGAGAATCATAAATTGCTCATCTATGAGTTTGTTCCCAATAGGACTCTTGAGCATCATCTCCATGGCGGCAATGAAGTCCCCGTGTTGGAATGGTCCAAAAGACTCAAAATCGCTTTGGGATCTGCAAAGGGCTTGGCGTATCTGCATGAAGATTATTTTGGACTTGCAAAACTGACAAATGATGCAAACACCCACGTTTCAACTCGTGTCATGGGGACATTTGGGTGGGCTCGACCTCTTCTCCTTCACGCCATTGAAACTGGGAAGTTCGACGGATTAATAGACCTTCGCCTTGGAAAACGTTATGTGGAAAGTCAAATGTTCAGAATGATCGAAGTAGCAGCTGCCTGCGTTCGTCATTCAGCTCCCAAAAGGCCTTGCATGGTTCAGGTGGTGAGAGCTCTGGACATTGAAAGTGACATGTCCGACCTCACCAATGGTGTCAAATTTGGACAGAGCACTACCTATGATTCTGAACAATACAGTGAAGACATCTCTAACTTCAGGAAACTGGCGTTCGAAGACAGCCCCGACTACGATGGTTACAGTAGCGAACACAATTCCAGAGAAATGAATGCAACTCGGGAATCATGGAGAAGTCAAAATAACTCAAGTGGTGAATCAGAAACTCGAGCTTTTAAGGGACAAAGTGGCGGCGTAACACACAGTCAACATACTGGACGATAA 2022 47.33 MSSSNDTSISSSHSDLDSSPPPSPQSDGLSLMSNEDVSESPIVSSKIKSPPADDGGSPSSTPKPNVGSSTPPPIDSSNSGSSKENPSPPPVPSASASPPPSPTFPPPSPLLIPSPPPPQLPSESGSDNPPPSSVPTKGSPASPGNPSSPIPGNNPSTPTNNGAASGSNTAKELPPSESTDSPPQSENTVVIPSPGANPARGKRNPSPPQEATSPTSDSNIFQPPSTPSTSNSTLDNLPQSSDSTPVETPLRQSNAPSSPSSSQTKVAVGVVVVGVIVIVMVAVIFIFTRKKKRRGDLESGPYLPPNNVCEKSDGNYNPDQHSGNSGSAEGIYTQVPHTPVGNSFGSQKGTGDRGSGVDSGVINSAKFFSYEELMEITSGFSRQNVLGEGGFGCVYQGLLPDGKPVAVKQLKAGSGQGEKEFKAEVEIISRVHHRHLVSLVGYCGSENHKLLIYEFVPNRTLEHHLHGGNEVPVLEWSKRLKIALGSAKGLAYLHEDYFGLAKLTNDANTHVSTRVMGTFGWARPLLLHAIETGKFDGLIDLRLGKRYVESQMFRMIEVAAACVRHSAPKRPCMVQVVRALDIESDMSDLTNGVKFGQSTTYDSEQYSEDISNFRKLAFEDSPDYDGYSSEHNSREMNATRESWRSQNNSSGESETRAFKGQSGGVTHSQHTGR 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3353628 3356703 + Cp4.1LG09g04970.1 Cpe09g00505 474871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00505 673 MobiDBLite consensus disorder prediction 1 264 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 521 648 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 498 521 - -
Cpe09g00505 673 SUPERFAMILY Protein kinase-like (PK-like) 360 580 IPR011009 -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 154 192 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 521 648 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 310 328 - -
Cpe09g00505 673 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Cpe09g00505 673 MobiDBLite consensus disorder prediction 624 673 - -
Cpe09g00505 673 Gene3D Transferase(Phosphotransferase) domain 1 360 587 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 498 521 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 69 496 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 624 638 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 206 264 - -
Cpe09g00505 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 69 496 - -
Cpe09g00505 673 ProSiteProfiles Protein kinase domain profile. 380 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00505 673 Pfam Protein tyrosine and serine/threonine kinase 383 496 IPR001245 GO:0004672|GO:0006468
Cpe09g00505 673 MobiDBLite consensus disorder prediction 1 45 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 54 84 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 85 125 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 295 328 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 133 153 - -
Cpe09g00505 673 MobiDBLite consensus disorder prediction 639 673 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00505 Cpe-Chr9:3353628 Cpe13g01009 Cpe-Chr13:8308041 2.50E-95 dispersed
Cpe18g00366 Cpe-Chr18:5038267 Cpe09g00505 Cpe-Chr9:3353628 1.22E-45 dispersed
Cpe01g01532 Cpe-Chr1:9173119 Cpe09g00505 Cpe-Chr9:3353628 2.50E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62600 PF07714 PK_Tyr_Ser-Thr 9.00E-18 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00505 - - csv:101215732 719.153