Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00565 ATGCAAATCAGTGATAAAAATCAGTGGGTTTTGTTCATTTTCTTTGATCTTCAAATGGGTTTTCCTCGTTTTTTGGTTTTGATTCTTCTCGTCGTTTCTTCAGTCGATTGTCAGGTTAAAGAGTTCATCAGTATAGACTGTGGTGGCTCCAAGAACTACACCGACCCAGTTACAGGTCTGGCATGGATATCCGACGCCGGAGTCATGGCTGCCGGTGGCTCATCGCCGGTGGAAAACCCACATGGGAACTTGATGCAATATGGAACACGGCGGGATTTTCCGATCGACGACAAGAAATACTGCTACACTTTGGAAACAGAGGAACGGAGAAGGTATTTGGTTCGAGCAACTTTTCAGTATGGGAGTTTGAAGAATGAAGAAACTTACCCTAAATTTGAGCTTTATTTGGATGCAACTAAGTGGTCGACTGTTACTATTTTTGATGCTTCGAGGGTTTATGTGAAGGAGATGATCATTAGAGCACCTTCAAGTTCATTTGATGTGTGCATATGCTGTGCTACTACTGGCTATCCGTTCATATCAACTCTTGAGCTACGCCCTTTTAACCTTTCGATGTATGCTACTGATTTTGAAGATGATTTCTTCTTGGAAGTTGCTGCTAGAGTGAATTTTGATCTTGAGAAGAGGCAAAATTATCTTGTGGGAGTAGCTCCTGGGACAGAGAGAATCAGTACTATGAACAACATCAATGTAATGACAAGAGAATATCCGCCTGTTAAGGTGATGCAAACAGCAGTTCTTGGCACAAAGGGAGTGCTCAGCTACAGGTTGAACTTGGATGATTTTCCTGCCAATGCCAGAGCTTATGCATATTTTGCTGAAATTGAAGAATTGGGTCAGAACGAGACTCGGAAGTTCAAATTGGAGGAACCGAACATTCCCGACTCGAGTAATGCAGTGGTGAATATTGCTGAGAATGCCAATGGGACCTATACTCTTTATGAACCGAGTTATATGAATGTCTCTTTGAGTTTTGTGCTTTCGTTCTCCTTTGTCAAGACTCGAGATTCAACACGAGGACCGCTTTTGAATGCATTGGAAATTAGCAGATATGTCGAGATTAATGCCAAGACCGATGGGCGAGATGAGGCTGTTGTAAATGCCTTACGTACCATGTCAGCGGAGAGCGTTCAGACAAATCAAGGCGATCCCTGTGTTCCAACGAGCTGGGAATGGGTGACATGTACTGCCACGAAACCGCCGAGAATATCGAAAATTGAGCTCTCTAGAAAGAACGTCAAGGGCGATATTCCTCCCGAGATCAATACTATGGACGGATTAACGGAATTGTGGTTAGATGGTAATTTCCTTGCAGGATCACTGCCCGACATGAGTAATCTAGTAAATTTGAAGATTTTACATCTAGAGAACAACAAATTGACAGGGACATTGCCTTCCTACTTGGGTACTTTGCCCAACTTACAGGAACTATATATTCAAAACAACGCTTTCTCGGGCGAAATACCGTCGGAGTTATTGGCAAAGAAACTCGTGTTTAATTTTCTATTACTCCACAAGCTTCGAAGACGGACGACGCCTTATCATAAAAAAGGTGGTTCTCTGAAAGCCAGCACAAAACGCTCTTCTGGCTACTCGATCGGCAAGGGGGACGAAGGCATTGCCTACTACTTATCTCTCGCCGAGCTGGAAGAAGCAACTAATAACTTTTCTAAGAAAGTCGGTAAAGGCAGCTTCGGATCAGTCTATTATGGGAAGATGGCGGATGGAAAAGAAGTAGCGGTTAAAATCATGGCCGAGTCATCGGCACATGGGAATCAGCAGTTTACAACCGAGGTTGCCTTATTATCACGAATTCATCACCGAAATTTGGTCCCTTTGATCGGGTACTGTGAAGAAGAGCATCAACGGATTCTCGTTTATGAATATATGCATAATGGAACGTTACGAGATCACTTATATGGTAGTACCGAACCGAAGCACTTGGACTGGCTGCCTCGTCTGCGCATTGCTGAAGATGCAGCTAAAGGGCTCGAGTATTTGCACACGGGATGCAGTCCAAGTATCATCCATCGAGATGTAAAAACGAGCAACATCCTCCTCGACATCAATATGAGAGCGAAAGTTTCCGACTTTGGCCTCTCGAGGCAAGCCGAGGAAGACTTGACCCATGTCTCGAGCGTCGCTCGAGGAACAGTAGGCTACCTGGATCCTGAGTACTACGCTAGTCAACAACTGACCGAAAAGAGCGACGTTTATAGTTTTGGAGTTGTTTTGCTCGAACTGATCTCCGGGAAGAAACCCGTCTCACCGGAGGACTATGGCAGTGAATTGAATATCGTTCATTGGGCGAGGTCGTTAGTCCATAAAGGGGACGTGACGAGCATCATCGATCCGTTTCTAAACGGAAAAGTCAAAATAGAATCGGTATGGAGAATCGCCGAAGTCGCCATTCAGTGTGTGCAGCAGCATGGAGTTTCCAGGCCAAGGATGCAGGAAGTCATTGTGGCTATACAAGATGCAATCAAGATTGAACAAGGCATAGAAGGAAACCAGAAACTATCTTCAAGCAGTTCAAGAACACAATCGTGTCGAAAAACGTTGCTGACGACGTTTCTCGAGATCGAGAGCCCCGACGGTTCGCTCCTTCCCTCTGCAAGATAA 2643 44.76 MQISDKNQWVLFIFFDLQMGFPRFLVLILLVVSSVDCQVKEFISIDCGGSKNYTDPVTGLAWISDAGVMAAGGSSPVENPHGNLMQYGTRRDFPIDDKKYCYTLETEERRRYLVRATFQYGSLKNEETYPKFELYLDATKWSTVTIFDASRVYVKEMIIRAPSSSFDVCICCATTGYPFISTLELRPFNLSMYATDFEDDFFLEVAARVNFDLEKRQNYLVGVAPGTERISTMNNINVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEELGQNETRKFKLEEPNIPDSSNAVVNIAENANGTYTLYEPSYMNVSLSFVLSFSFVKTRDSTRGPLLNALEISRYVEINAKTDGRDEAVVNALRTMSAESVQTNQGDPCVPTSWEWVTCTATKPPRISKIELSRKNVKGDIPPEINTMDGLTELWLDGNFLAGSLPDMSNLVNLKILHLENNKLTGTLPSYLGTLPNLQELYIQNNAFSGEIPSELLAKKLVFNFLLLHKLRRRTTPYHKKGGSLKASTKRSSGYSIGKGDEGIAYYLSLAELEEATNNFSKKVGKGSFGSVYYGKMADGKEVAVKIMAESSAHGNQQFTTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDHLYGSTEPKHLDWLPRLRIAEDAAKGLEYLHTGCSPSIIHRDVKTSNILLDINMRAKVSDFGLSRQAEEDLTHVSSVARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGSELNIVHWARSLVHKGDVTSIIDPFLNGKVKIESVWRIAEVAIQCVQQHGVSRPRMQEVIVAIQDAIKIEQGIEGNQKLSSSSSRTQSCRKTLLTTFLEIESPDGSLLPSAR 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3899379 3907016 - Cp4.1LG09g06080.1 Cpe09g00565 474931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00565 880 SMART serkin_6 561 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00565 880 CDD STKc_IRAK 567 828 - -
Cpe09g00565 880 Pfam Protein tyrosine and serine/threonine kinase 563 828 IPR001245 GO:0004672|GO:0006468
Cpe09g00565 880 PANTHER - 32 499 - -
Cpe09g00565 880 PANTHER - 507 848 - -
Cpe09g00565 880 Gene3D Phosphorylase Kinase; domain 1 538 636 - -
Cpe09g00565 880 PANTHER OS07G0107800 PROTEIN-RELATED 32 499 - -
Cpe09g00565 880 PANTHER OS07G0107800 PROTEIN-RELATED 507 848 - -
Cpe09g00565 880 ProSiteProfiles Protein kinase domain profile. 561 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00565 880 SUPERFAMILY Protein kinase-like (PK-like) 546 828 IPR011009 -
Cpe09g00565 880 Pfam Malectin-like domain 45 356 IPR024788 -
Cpe09g00565 880 Gene3D Transferase(Phosphotransferase) domain 1 637 855 - -
Cpe09g00565 880 Pfam Leucine Rich repeats (2 copies) 456 495 IPR025875 -
Cpe09g00565 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Cpe09g00565 880 Gene3D Ribonuclease Inhibitor 369 517 IPR032675 -
Cpe09g00565 880 ProSitePatterns Protein kinases ATP-binding region signature. 567 589 IPR017441 GO:0005524
Cpe09g00565 880 SUPERFAMILY L domain-like 392 499 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01589 Cpe09g00565 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01933 Cpe-Chr1:16462560 Cpe09g00565 Cpe-Chr9:3899379 1.25E-54 dispersed
Cpe03g00155 Cpe-Chr3:780043 Cpe09g00565 Cpe-Chr9:3899379 0 dispersed
Cpe06g00963 Cpe-Chr6:9072758 Cpe09g00565 Cpe-Chr9:3899379 9.27E-69 dispersed
Cpe08g01125 Cpe-Chr8:8446306 Cpe09g00565 Cpe-Chr9:3899379 0 dispersed
Cpe09g00565 Cpe-Chr9:3899379 Cpe03g01085 Cpe-Chr3:8964791 2.64E-137 dispersed
Cpe15g00491 Cpe-Chr15:5885705 Cpe09g00565 Cpe-Chr9:3899379 1.01E-34 dispersed
Cpe18g00522 Cpe-Chr18:5917172 Cpe09g00565 Cpe-Chr9:3899379 2.47E-62 dispersed
Cpe01g01589 Cpe-Chr1:9713540 Cpe09g00565 Cpe-Chr9:3899379 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62601 PF12819 Malectin_like 1.20E-72 CL0202 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00565 - - csv:101207149 1531.15