Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00574 ATGTCGTTGAAGAACTACAACAGAAAGCAGATTTCTTGCGTGACTGTTAATTGCTTGAACGTCGATGGCGATCTTCTGAGCTTATTCTCTGTTACAGCCATGGGGTTTTTAGGGTTTTTCAAGAGGTTTAATGGCCTCCAAAAATTTGATGCCTCTCTTCGAGCACTACCACTTGGGTACGTTCAGAGCAGAGGCTTATCAAATTCCAAGCTTTTCCATGGCGGCGAAGAAACTGCGGTTCCGGTTTTAATTGTCGGTGCAGGACCTGTAGGCCTCGTCCTTGCTATTCTTCTCACGAAATTAGGGGTCAAGTGTGCAATTTTGGAGAAGAACACAAGTTTTTCTAATCATCCGCAAGCTCACTTCATAAATAACAGATCAATGGAGGTATTTCGAAAATTGGATGGACTAGCAGAGGAGATACAATTACGCCAACCGCCTGTAGATTCATGGAGAAAGTTCATATATTGTACTTCACTGAAGGGTACAATTCTCGGATCTGTGGACCATATGCAACCTCAAGATTTTGAGCACATTATCAGCCCGGTTTCTGTTGCACATTTCTCCCAATACAAATTAAACAGGTTACTACTTAAGCAACTTCAAAATCTTGGGTTTCAAGTCTGTTCACCAGATAGCTCGGAGGGCCCCTGTATAGTTAGAGAAAAGCAAATACTTATGGGGCATGAGTGTGTTTCTATTGGTGTCACTGATGATGCTGTGACCATGACTGCATCTTATCTCAAGGAAGGGAAGCATATCGAGAGGAGGAATATATGCAGTAATATCCTTGTTGGTGCAGACGGTGCTGGAAGTACTGTCCGGAGGCTTGTAGGCATTGAAATGAAGGGTGAAAAAGACTTACAAAAGCTTGTAAGCATCCATTTTTTTAGTAGAGAGCTTGGTGAATATCTGCTAACTGAGAGGCCTGGTATGCTATATTTCATCTTTAACACTGAAGCTATAGGGGTTCTTGTTGCTCATGATCTCAAGCAAGGGGAATTCATATTGCAGGTACCATTCTATCCTCCTCAACAAAACATTGAAGATTTCTGTCCTAAGATGTGTGAGGAGATTATCTTCGATTTGGTTGGTCTAAACCTCTGTGACGTAGACGTGCAAGATGTAAAACCTTGGATTATGCATGCTGAAGTCGCTGAGAAGTTCATATCCTGTCAAGGTCGTGTATTACTTGCTGGTGATGCTGCTCATCGATTTCCTCCAGCTGGTGGTTTTGGAATGAATACTGGAATTCAAGACGTTCATAATCTTGCCTGGAAATTAGCTGCAGTGCTACAGGATATTGCATCACCTTCAATATTGAATACTTATGAAATGGAAAGGAAGCCGATAGCACTACTCAATACGGCCCTTAGCGTTAAGAACTTCAAAGCAGCCATGGAAATACCTGCGGCTCTAGGTCTGGATCCAAAAATTGCAAACTCTGTGCACCAAGCAGTTAACCATGGCCTTGGTTCTGTTTTATCATCCTCACTACAGAGAACAGTTCTGGATGGAATTTTTAAGATAGGTCGTTTGCAGCTCTCAGATACTCTTCTGAACGATAAAAACCCGGTTGGATCTTCAAGGCTTGCAAAACTCAGTCATATATTTCATGAAGGGAAGAGCCTTCAACTTCAGTACTCTGAAGGGGCACTTATTCCGGACAATAATCAACCTGGTGGTCGAGAAGAGCCTACAGGTCGTCGGAGAAGGTACATCCCTTCTGCAGACCCAGGATCAAAGCTGCCTCATATGAATGTGAGGGCATTGGCCAGTATGGAGGTGATTTCTACTCTTGATCTTGTATCCGGGGATAAAGTTGAATTCCTTCTCATAATAGCACCGCTACCGGACTCTTACCGTCTTGCTCGTGCAGCTCTCATGGTAGCTGAGGAATTCAAAACTTCGGTTAGGGTATGCATTTTATGGTCTGCTGATATAACCAGGATTGAATCAAGCAGCAAGGAAGAACTAACACCATGGGAGAACTACATTGATGTTCAAGAAATTCGGCAACCATCCACTTCAGCAGCATCATGGTGGGATGTCTGTCAGATGACTGACAAGGGAGCGATCCTAGTTCGGCCTGACGAGCATGTTGGTTGGAGGGTGAAGTCTGGTGTTTCTGGTGATCCAAACACAGAACTTAGAAGAGTTTTTACCACTCTGTTGAAGTGA 2181 43.42 MSLKNYNRKQISCVTVNCLNVDGDLLSLFSVTAMGFLGFFKRFNGLQKFDASLRALPLGYVQSRGLSNSKLFHGGEETAVPVLIVGAGPVGLVLAILLTKLGVKCAILEKNTSFSNHPQAHFINNRSMEVFRKLDGLAEEIQLRQPPVDSWRKFIYCTSLKGTILGSVDHMQPQDFEHIISPVSVAHFSQYKLNRLLLKQLQNLGFQVCSPDSSEGPCIVREKQILMGHECVSIGVTDDAVTMTASYLKEGKHIERRNICSNILVGADGAGSTVRRLVGIEMKGEKDLQKLVSIHFFSRELGEYLLTERPGMLYFIFNTEAIGVLVAHDLKQGEFILQVPFYPPQQNIEDFCPKMCEEIIFDLVGLNLCDVDVQDVKPWIMHAEVAEKFISCQGRVLLAGDAAHRFPPAGGFGMNTGIQDVHNLAWKLAAVLQDIASPSILNTYEMERKPIALLNTALSVKNFKAAMEIPAALGLDPKIANSVHQAVNHGLGSVLSSSLQRTVLDGIFKIGRLQLSDTLLNDKNPVGSSRLAKLSHIFHEGKSLQLQYSEGALIPDNNQPGGREEPTGRRRRYIPSADPGSKLPHMNVRALASMEVISTLDLVSGDKVEFLLIIAPLPDSYRLARAALMVAEEFKTSVRVCILWSADITRIESSSKEELTPWENYIDVQEIRQPSTSAASWWDVCQMTDKGAILVRPDEHVGWRVKSGVSGDPNTELRRVFTTLLK 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3964469 3972081 - Cp4.1LG09g06070.1 Cpe09g00574 474940

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00574 726 Gene3D - 539 726 - -
Cpe09g00574 726 MobiDBLite consensus disorder prediction 554 578 - -
Cpe09g00574 726 SUPERFAMILY FAD/NAD(P)-binding domain 81 471 IPR036188 -
Cpe09g00574 726 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 80 722 - -
Cpe09g00574 726 Gene3D - 148 388 - -
Cpe09g00574 726 Gene3D - 81 452 IPR036188 -
Cpe09g00574 726 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 80 722 - -
Cpe09g00574 726 Pfam FAD binding domain 80 452 IPR002938 GO:0071949
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 81 103 - -
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 393 408 - -
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 444 460 - -
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 408 424 - -
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 260 275 - -
Cpe09g00574 726 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 426 444 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00574 - - - cmos:111449881 1407.12
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1154 . . . . . . . Bma15g00241 . . . . . . . Cpe09g00574 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005022 1 5 1 1 1 2 1 3 2 0 1 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 3 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe09g00574 Cpe_Chr09 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0