Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00581 ATGGAGATGAAAATGAGTAATTTTAATTTTTACCGTTATTTTATCCTTTTTATTTATCCTTTTTATTTATCCTTTCATCCAAAGTCTCATAGGCAACCACCTCTCTTCTTCTTTAACAACATTTCTCACTTCCTCTTCTTCATTCCGATCAACCTCCGATCTTCCTCCATATTCTCGTCGCCGTTCGATTCCTCTTTTTCTCCATTTTCTTCTGCTTACTGCTTCCTTCTCCGGTCTCCGTCGCCGCCGCTTTCGGGGAAGACGACGGTGGTGATGATGAAGAAGACTCTGTTGTTTCTCCTCTTCATTTTTCACTTTCATGTCTCGTTCAAGGTTTTAGCCCTTTCGCCGGACGGTCTCTCGCTTCTTTCTCTCAAGTCGGCGGTTGATCAGTCGCCTGATTCATCTATTTTCTCTGATTGGAACGAGAATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAATGTTTCCGGTGATTCGCGTGTGGTTGGGATTGCTCTCTCTGGTAAGAGTCTCCATGGCTATATTCCTTCTGAGCTTGGTTCGCTTGTTTATCTCCGGCGATTGAACCTCCATAACAACAATTTTTACGGCTCGATACCGGAGCAGTTGTTTAATGCTACCTCTTTGCATAGCTTATTTCTCTATAGTAATAATCTCTCTGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCTAACAATTCTTTCGCTGGACCAATCCCCGACGAATTGAAGAATTGCAAGCAATTGCAGCGTTTGATACTCGCTAGAAATCAATTTGAAGGAGAAATTCCTTCTGGTATGTGGTCCGGGATGGATAATTTACGGCAACTCGACCTCTCATCCAACGATTTCAGTGGACCGATTCCGGAGGATTTGGGGGAACTGACGACACTTTCCGGTACGCTCAACCTGTCCTTCAATCATTTATCGGGAAAAATTCCGAAGACGCTAGGAGATTTGCCGGTGACGGTGAGTTTCGACCTCCGGAGCAACAATTTGAGTGGAAGCATACCTCAGACTGGTTCTTTTGCAAATCAGGGACCAACTGCATTTCTCAACAATCCTAAGTTGTGCGGATTTCCTCTTCAGAAATCCTGTGGGAGTTCAGAGCGTGGCTCACCGGGAAATCCGGCTTCTAGGCCTTCGTACAATGCCCCTGGAAAAGGCTTGGGCGCCGGATTAATCATTCTCATCTCTGCCGCCGATGCCGCCGGAGTGGCGTTTATCGGCCTGGTAATAGTATACATATATTGGCGAAGTAAAGACAATCCAAACGGCTGTAGCTGTACGTCCAAAGGAAAACTCGGAGGGAACCAGAAAAACGATCTATGCAATTTTCCTTGTATGAATGGACATAATAAGAACGAGGAGTCCGAAATGGAGGAACAGGAGAACAGTGACGGAAACAGAGAAGAAGGAGGGCTTGTGGCCATAGACAAAGGCTTTACGTTCGAGCTGGACGAGCTGCTGAGAGCATCGGCCTATGTGCTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTGCTCGGAAATGGGATTCCGGTGGCCGTACGGCGGCTGGGCGAAGGCGGAGAACAGAGGTATAAGGAGTTCGCGGCGGAGGTGCAGGCCATTGGAAGGGTAAAACATCCCAATATTGTGAAACTGAGAGCTTATTACTGGGCGCCAGATGAGAAGCTCCTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCACTTCGCGGGAGAAACGGGCAGCCATCTTCAAGCCTTTCATGGTCAACCAGACTACGAATTGCCAAGGGAACTGCAAGGGGGTTGGCCTATCTCCACGAGTGCAGCCCAAGAAAGTTCGTCCATGGCGACATCAAGCCCTCCAACATCCTCCTCGACAACGAATTCCGCCCCCACATCTCCGACTTCGGCCTCAGCAGATTGATCACCATCACCGGCAACAATCCCTCCTCCTCTGGCGGCCTCATCGGCGGCGCCTTCTCCTATCTCAAATCCGCCCCAACCGACCGCAACAACAACTACTGCGCTCCGGAGGCTCGAGCTCCCGGCGCCCGCCCTACCCAAAAATGGGACGTCTATTCCTTCGGTGTAATGGTCCTCGAATTGCTCACCGGAAAGCCGCCGGAGCTTTCTCCGAACGCGTCGAGTTCTTTGGAGATTCCGGATTTGGTGAGGTGGGTCAGGCAAGGGTTTGAAGAAGCTAAGCCGTTGTCGGATTTGGTTGACCCTTCTCTTCTACAAGAAGTACATGCCAAGAAAGAGGTGCTTGCTGTATTCCACGTGGCGCTCGCCTGTACAGAGAGTGACCCGGAAGTTCGGCCCAGAATGAAAACGGTGTCGGAGAGTTTCGACAGGATTGGATGA 2403 49.44 MEMKMSNFNFYRYFILFIYPFYLSFHPKSHRQPPLFFFNNISHFLFFIPINLRSSSIFSSPFDSSFSPFSSAYCFLLRSPSPPLSGKTTVVMMKKTLLFLLFIFHFHVSFKVLALSPDGLSLLSLKSAVDQSPDSSIFSDWNENDSTPCRWSGISCMNVSGDSRVVGIALSGKSLHGYIPSELGSLVYLRRLNLHNNNFYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSFAGPIPDELKNCKQLQRLILARNQFEGEIPSGMWSGMDNLRQLDLSSNDFSGPIPEDLGELTTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPKLCGFPLQKSCGSSERGSPGNPASRPSYNAPGKGLGAGLIILISAADAAGVAFIGLVIVYIYWRSKDNPNGCSCTSKGKLGGNQKNDLCNFPCMNGHNKNEESEMEEQENSDGNREEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNEFRPHISDFGLSRLITITGNNPSSSGGLIGGAFSYLKSAPTDRNNNYCAPEARAPGARPTQKWDVYSFGVMVLELLTGKPPELSPNASSSLEIPDLVRWVRQGFEEAKPLSDLVDPSLLQEVHAKKEVLAVFHVALACTESDPEVRPRMKTVSESFDRIG 800
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4019405 4024199 + Cp4.1LG09g06010.1 Cpe09g00581 474947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00581 800 SUPERFAMILY Protein kinase-like (PK-like) 508 793 IPR011009 -
Cpe09g00581 800 Pfam Protein kinase domain 508 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00581 800 Pfam Leucine Rich Repeat 285 306 IPR001611 GO:0005515
Cpe09g00581 800 Pfam Leucine rich repeat 189 246 IPR001611 GO:0005515
Cpe09g00581 800 Gene3D Transferase(Phosphotransferase) domain 1 579 800 - -
Cpe09g00581 800 Gene3D Ribonuclease Inhibitor 117 278 IPR032675 -
Cpe09g00581 800 SUPERFAMILY L domain-like 120 375 - -
Cpe09g00581 800 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 96 800 - -
Cpe09g00581 800 Gene3D Ribonuclease Inhibitor 282 376 IPR032675 -
Cpe09g00581 800 CDD STKc_IRAK 509 799 - -
Cpe09g00581 800 Gene3D Phosphorylase Kinase; domain 1 495 578 - -
Cpe09g00581 800 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 96 800 - -
Cpe09g00581 800 Pfam Leucine rich repeat N-terminal domain 116 156 IPR013210 -
Cpe09g00581 800 SMART serkin_6 507 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00581 800 ProSiteProfiles Protein kinase domain profile. 503 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00581 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01609 Cpe09g00581 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01329 Cpe-Chr1:7998923 Cpe09g00581 Cpe-Chr9:4019405 0 dispersed
Cpe01g01802 Cpe-Chr1:14985673 Cpe09g00581 Cpe-Chr9:4019405 2.76E-164 dispersed
Cpe09g00320 Cpe-Chr9:1913703 Cpe09g00581 Cpe-Chr9:4019405 0 dispersed
Cpe09g00581 Cpe-Chr9:4019405 Cpe10g01174 Cpe-Chr10:8637226 6.86E-162 dispersed
Cpe01g01609 Cpe-Chr1:9834323 Cpe09g00581 Cpe-Chr9:4019405 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62603 PF00069 Pkinase 6.10E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00581 - - cmax:111466327 1424.45