Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00623 ATGGCCACTCCGCCGCTCCACGCCACCGCCTTATCTAACTCTTCCCCTTACTCAAATCTCTACGGAATCCACCACAACCCTTCCCCTCCTCCTTTTCTGAATCAAGAACACCCAGCTTTTGATTTTGGAGAGCTTGAAGAAGCCATCGTTTTGCAAGGAGTTAAGCTCGGAAATGATGAACACAAATCGCCACATTTTGTTTCAGGGAGGCCTGCTGCTACTCTTGAAATGTTCCCTTCTTGGCCAATAAGGTTTCAACAAACCCCAACAATGGGAGAAGGTTCAAAGTCAGAGAGCACTGATTCAGGTTCAGCGAACATAAACAACGCGCTCACAAGCAAAACAGAGTTGGAAATGGAATCTGATTCGCCGATTAGCAGAAGGCTCTGTTCTTCAGCTCAAGGATTTGACCAAGTTCTTCATCATCATCATCATCATCATCTTCAAACAGAGCTTGAAGATGATGCCTTGAGAATAGAACCATCATCGCACCCTAATCAATCCCCTGTCGAAGGAAAGAGAAAAGGAGGTGGTTCAACATCAGAGAGGCAGCTTGATCCAAAGACACTGAGACGTTTGGCTCAAAACCGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCTTATATTCAGCAACTAGAGTCCAGTAGAATGAAGCTCTCTCAGCTTGAACAAGACCTCCATAGAGCACGTTCTCAGGGATTGTTTCTAGGAGCTTGTGGTGGCGTTATGGGAGCTGCAATATTTGACATGGAGTATGCACGTTGGCTAGACGACGACCACCGTCTAATGGCAGAGCTGCGGGCGGCGCTGCATGGGTATCTCCCGGACGGTGACCTCCAAGCAATAGTAGACAATTACATCTCCCACTACGACGAAATCTTTCACCTGAAAAGTGTGGCGGCGAAATCCGACGTGTTTCATTTGATTACCGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGACCATCTAAGCTGATAGAGATGCTAATTCCACAATTAGAAACATTAACAGATCAACAAGCTGTGGAAATCTGTAGTTTACAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAAGGGCTCGAACAGCTCCAACATTCTCTCATACGTGCCATCGCCGGTACCGCCGTCGTTGACGGTATCAACCATATGGCCGCTGCCGCAGGCCAACTCTCCAATCTCGAAGGCTTCATCCGTCAGGCTGATATGTTGAGACAACAAACGCTTCATCAAGTACGTCGAATTCTGACAATTCGACAAGCCGCACGATGTTTCGTCGTGATTGGAGAATACTACGAAAGACTTCGAGCTCTTAGTTCTTTGTGGGTCTCCCGACCCAGAGAGAATTGCATGAACGAGGAGAACTCATGCCAAACAACGACCGAGCTACAAATGATTCAGAATTCGCACCACCATTTCCCGAACTTTTGA 1461 47.64 MATPPLHATALSNSSPYSNLYGIHHNPSPPPFLNQEHPAFDFGELEEAIVLQGVKLGNDEHKSPHFVSGRPAATLEMFPSWPIRFQQTPTMGEGSKSESTDSGSANINNALTSKTELEMESDSPISRRLCSSAQGFDQVLHHHHHHHLQTELEDDALRIEPSSHPNQSPVEGKRKGGGSTSERQLDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRMKLSQLEQDLHRARSQGLFLGACGGVMGAAIFDMEYARWLDDDHRLMAELRAALHGYLPDGDLQAIVDNYISHYDEIFHLKSVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLETLTDQQAVEICSLQRSSQETEDALYQGLEQLQHSLIRAIAGTAVVDGINHMAAAAGQLSNLEGFIRQADMLRQQTLHQVRRILTIRQAARCFVVIGEYYERLRALSSLWVSRPRENCMNEENSCQTTTELQMIQNSHHHFPNF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4553663 4558145 - Cp4.1LG09g05580.1 Cpe09g00623 474989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00623 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 230 IPR004827 GO:0003700|GO:0006355
Cpe09g00623 486 SUPERFAMILY Leucine zipper domain 188 230 IPR046347 GO:0003700|GO:0006355
Cpe09g00623 486 CDD bZIP_HBP1b-like 188 239 - -
Cpe09g00623 486 Gene3D - 187 236 - -
Cpe09g00623 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Cpe09g00623 486 MobiDBLite consensus disorder prediction 86 107 - -
Cpe09g00623 486 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
Cpe09g00623 486 ProSiteProfiles DOG1 domain profile. 247 455 IPR025422 GO:0006351|GO:0043565
Cpe09g00623 486 PANTHER TRANSCRIPTION FACTOR TGA9 63 465 - -
Cpe09g00623 486 Coils Coil 207 234 - -
Cpe09g00623 486 MobiDBLite consensus disorder prediction 176 191 - -
Cpe09g00623 486 MobiDBLite consensus disorder prediction 159 191 - -
Cpe09g00623 486 Pfam bZIP transcription factor 188 229 IPR004827 GO:0003700|GO:0006355
Cpe09g00623 486 PANTHER TRANSCRIPTION FACTOR TGA9 63 465 - -
Cpe09g00623 486 SMART brlzneu 184 247 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01353 Cpe09g00623 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00623 Cpe-Chr9:4553663 Cpe20g00685 Cpe-Chr20:4812582 2.33E-167 dispersed
Cpe09g00623 Cpe-Chr9:4553663 Cpe08g01342 Cpe-Chr8:9665720 1.52E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50007 PF14144 DOG1 2.50E-30 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00623 K14431 - csv:101204604 789.645