Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00623 | ATGGCCACTCCGCCGCTCCACGCCACCGCCTTATCTAACTCTTCCCCTTACTCAAATCTCTACGGAATCCACCACAACCCTTCCCCTCCTCCTTTTCTGAATCAAGAACACCCAGCTTTTGATTTTGGAGAGCTTGAAGAAGCCATCGTTTTGCAAGGAGTTAAGCTCGGAAATGATGAACACAAATCGCCACATTTTGTTTCAGGGAGGCCTGCTGCTACTCTTGAAATGTTCCCTTCTTGGCCAATAAGGTTTCAACAAACCCCAACAATGGGAGAAGGTTCAAAGTCAGAGAGCACTGATTCAGGTTCAGCGAACATAAACAACGCGCTCACAAGCAAAACAGAGTTGGAAATGGAATCTGATTCGCCGATTAGCAGAAGGCTCTGTTCTTCAGCTCAAGGATTTGACCAAGTTCTTCATCATCATCATCATCATCATCTTCAAACAGAGCTTGAAGATGATGCCTTGAGAATAGAACCATCATCGCACCCTAATCAATCCCCTGTCGAAGGAAAGAGAAAAGGAGGTGGTTCAACATCAGAGAGGCAGCTTGATCCAAAGACACTGAGACGTTTGGCTCAAAACCGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCTTATATTCAGCAACTAGAGTCCAGTAGAATGAAGCTCTCTCAGCTTGAACAAGACCTCCATAGAGCACGTTCTCAGGGATTGTTTCTAGGAGCTTGTGGTGGCGTTATGGGAGCTGCAATATTTGACATGGAGTATGCACGTTGGCTAGACGACGACCACCGTCTAATGGCAGAGCTGCGGGCGGCGCTGCATGGGTATCTCCCGGACGGTGACCTCCAAGCAATAGTAGACAATTACATCTCCCACTACGACGAAATCTTTCACCTGAAAAGTGTGGCGGCGAAATCCGACGTGTTTCATTTGATTACCGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGACCATCTAAGCTGATAGAGATGCTAATTCCACAATTAGAAACATTAACAGATCAACAAGCTGTGGAAATCTGTAGTTTACAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAAGGGCTCGAACAGCTCCAACATTCTCTCATACGTGCCATCGCCGGTACCGCCGTCGTTGACGGTATCAACCATATGGCCGCTGCCGCAGGCCAACTCTCCAATCTCGAAGGCTTCATCCGTCAGGCTGATATGTTGAGACAACAAACGCTTCATCAAGTACGTCGAATTCTGACAATTCGACAAGCCGCACGATGTTTCGTCGTGATTGGAGAATACTACGAAAGACTTCGAGCTCTTAGTTCTTTGTGGGTCTCCCGACCCAGAGAGAATTGCATGAACGAGGAGAACTCATGCCAAACAACGACCGAGCTACAAATGATTCAGAATTCGCACCACCATTTCCCGAACTTTTGA | 1461 | 47.64 | MATPPLHATALSNSSPYSNLYGIHHNPSPPPFLNQEHPAFDFGELEEAIVLQGVKLGNDEHKSPHFVSGRPAATLEMFPSWPIRFQQTPTMGEGSKSESTDSGSANINNALTSKTELEMESDSPISRRLCSSAQGFDQVLHHHHHHHLQTELEDDALRIEPSSHPNQSPVEGKRKGGGSTSERQLDPKTLRRLAQNREAARKSRLRKKAYIQQLESSRMKLSQLEQDLHRARSQGLFLGACGGVMGAAIFDMEYARWLDDDHRLMAELRAALHGYLPDGDLQAIVDNYISHYDEIFHLKSVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLETLTDQQAVEICSLQRSSQETEDALYQGLEQLQHSLIRAIAGTAVVDGINHMAAAAGQLSNLEGFIRQADMLRQQTLHQVRRILTIRQAARCFVVIGEYYERLRALSSLWVSRPRENCMNEENSCQTTTELQMIQNSHHHFPNF | 486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4553663 | 4558145 | - | Cp4.1LG09g05580.1 | Cpe09g00623 | 474989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00623 | 486 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 186 | 230 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe09g00623 | 486 | SUPERFAMILY | Leucine zipper domain | 188 | 230 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe09g00623 | 486 | CDD | bZIP_HBP1b-like | 188 | 239 | - | - | |
Cpe09g00623 | 486 | Gene3D | - | 187 | 236 | - | - | |
Cpe09g00623 | 486 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 191 | 206 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe09g00623 | 486 | MobiDBLite | consensus disorder prediction | 86 | 107 | - | - | |
Cpe09g00623 | 486 | Pfam | Seed dormancy control | 265 | 339 | IPR025422 | GO:0006351|GO:0043565 | |
Cpe09g00623 | 486 | ProSiteProfiles | DOG1 domain profile. | 247 | 455 | IPR025422 | GO:0006351|GO:0043565 | |
Cpe09g00623 | 486 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 63 | 465 | - | - | |
Cpe09g00623 | 486 | Coils | Coil | 207 | 234 | - | - | |
Cpe09g00623 | 486 | MobiDBLite | consensus disorder prediction | 176 | 191 | - | - | |
Cpe09g00623 | 486 | MobiDBLite | consensus disorder prediction | 159 | 191 | - | - | |
Cpe09g00623 | 486 | Pfam | bZIP transcription factor | 188 | 229 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe09g00623 | 486 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 63 | 465 | - | - | |
Cpe09g00623 | 486 | SMART | brlzneu | 184 | 247 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g01353 | Cpe09g00623 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g00623 | Cpe-Chr9:4553663 | Cpe20g00685 | Cpe-Chr20:4812582 | 2.33E-167 | dispersed | |
Cpe09g00623 | Cpe-Chr9:4553663 | Cpe08g01342 | Cpe-Chr8:9665720 | 1.52E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50007 | PF14144 | DOG1 | 2.50E-30 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00623 | K14431 | - | csv:101204604 | 789.645 |