Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00709 ATGTTCTGCAATTTATTTGAGATGGACAATGATAACTATCAGCAAGCGGGTGATTTGACCGATGTAATTCGAGCTAGTTCCGCCGCCACCTCAGCTGCCCACTCATCGGAATTCTCTCTCGGCGACCGCCATCTCTTGCCTCACCTTCCCACCGATGACTCTTCCATGAATTTTGGAGATCCCTTGTTGCTTCCCACTTCTAGTACTCGAGATCCATTTCTTCATCCCCATTTCTCTTCCTTCAATTTTGATTCTCACGGCGGCGGTTGGGGTTTCACGGCGGCGGAACGGCCTTCTACTGTATTTCCAAGAATGTTGCAGATCTCTCCCACCTCCAAAGTTGTTGACGGTGTAATTACTACTCCTCCATGCGACTCACCGGCCGTGGCGGCCACGGGGAATTCTCCGACTTCAAACCCGCTTTGCTTAAGGGATAATTCCGACCTCCAGATCTCTCCTCCACGAAATCCCGCCATTAAAAGAAGGAAGAACCAAGTGAAGAAGGTGGTGTGCATTCCGGCGCCGGCGCCGGCAAACAGCCGATCAAGCAGCGGCGAAGTTGTCCCCTCCGATCTATGGGCATGGAGGAAGTACGGACAAAAACCCATCAAAGGATCTCCCTATCCAAGGGGGTATTACAGGTGTAGCAGCTCCAAAGGCTGCTCGGCTCGAAAGCAAGTCGAGCGTAGCCGAACCGATCCCAACATGCTCGTCATCACCTACACTTCGGAGCATAACCACCCATGGCCTACTCAACGTAATGCGCTAGCAGGCTCAACTCGCTCCCACCCTTCTCGAACCTCCACTTCCACTACACGTATAACAAGCCCAAAACATGAGAACAACAATGAAAACCTAGCAAGTATGACGATAAAGGAGGAGGATATGAATGAAGAGCAAATGACGGAGAAAGCAGCAATAACAACAAACCAACATCAGGTCGAGGGAGATCATCAGGAGTTCTTATACGACTTGATTTTCGACGAATTTGCCGATCAAATGAACGAGCACAATCGTCATCATGCAACGGACACGATGAACGATAACCTTCTCCGGTTTAGTAACCATGGGTTTAGTAAAGGAAATGATGAAGAGTGTAGTAAAGATCCATTTTTGGAGCTCTATGATTGGACAGAGAAGTCAAATGGGAGCTTGTTCAAATAA 1164 48.88 MFCNLFEMDNDNYQQAGDLTDVIRASSAATSAAHSSEFSLGDRHLLPHLPTDDSSMNFGDPLLLPTSSTRDPFLHPHFSSFNFDSHGGGWGFTAAERPSTVFPRMLQISPTSKVVDGVITTPPCDSPAVAATGNSPTSNPLCLRDNSDLQISPPRNPAIKRRKNQVKKVVCIPAPAPANSRSSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSHPSRTSTSTTRITSPKHENNNENLASMTIKEEDMNEEQMTEKAAITTNQHQVEGDHQEFLYDLIFDEFADQMNEHNRHHATDTMNDNLLRFSNHGFSKGNDEECSKDPFLELYDWTEKSNGSLFK 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6350681 6352480 - Cp4.1LG09g07110.1 Cpe09g00709 475075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00709 387 Pfam WRKY DNA -binding domain 191 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe09g00709 387 ProSiteProfiles WRKY domain profile. 184 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe09g00709 387 MobiDBLite consensus disorder prediction 246 282 - -
Cpe09g00709 387 MobiDBLite consensus disorder prediction 129 153 - -
Cpe09g00709 387 SUPERFAMILY WRKY DNA-binding domain 187 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe09g00709 387 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 94 380 IPR044810 GO:0003700
Cpe09g00709 387 SMART WRKY_cls 189 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe09g00709 387 MobiDBLite consensus disorder prediction 129 156 - -
Cpe09g00709 387 Gene3D WRKY domain 162 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe09g00709 387 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 94 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01525 Cpe-Chr2:12993881 Cpe09g00709 Cpe-Chr9:6350681 1.68E-32 dispersed
Cpe09g00709 Cpe-Chr9:6350681 Cpe13g00277 Cpe-Chr13:2202479 1.77E-38 dispersed
Cpe20g00477 Cpe-Chr20:2758523 Cpe09g00709 Cpe-Chr9:6350681 9.10E-35 dispersed
Cpe19g01184 Cpe-Chr19:7950073 Cpe09g00709 Cpe-Chr9:6350681 1.10E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50014 PF03106 WRKY 2.00E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00709 - - csv:101220733 521.546