Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00714 ATGCCGATGGTGGAGGAAGGGATCAGAAGAAGATCCTGTGGTTGTTCGAAGGAAGATTTTCTGCCAGAGGAGTCGTTTAAGAGTTGGAGAAATTACTCTAAAGCGCTGAAGGCGACGCCGACCCGACTCTTGGATCGGCTCACGGCCAGGTCCGGGGAGCACACCAAGCTCGTCGAGATGAAGGCTCGGAGCCAGCACGAGATGAAGAAGAGCCTCACATGGTGGGACCTTATGTGGTTCGGTATCGGCGCCGTCATTGGCGCAGGAATATTTGTCCTCACCGGTCTTGAGACTAAAAAACACGCCGGCCCAGCTATCGTCTTGTCTTATGTCGTCTCCGGTGTCTCCGCCATGCTTTCTGTTTTTTGTTACACTGAGTTCGCGGTCGAGATCCCGGCAGCCGGTGGATCATTCGCCTACCTAAGGGTAGAATTAGGAGACTTCATGGCATTCATCACGGCGGGCAACATCCTCCTTGAATATGTAATTGGCGGCGCTGCTGTGGCCCGTTCATGGACTTCATACTTTGCCACTTTGTGCAATCACCATCCGAACGATTTTCGCATCCACGTCTCGTCTTTTCCAGACGACTATAACCAGCTCGACCCCATCGCCATCGTTGTGATTATTGTCATTTGCACCTTGGCTGTAGCCAGCACCAAAGGCTCCTCTCGCTTCAACTACATTGCTTCCATTTTCCACGTTGTCATCATCCTCTTCATTATCATTGCTGGCCTCACCAAGGCCAACCCGAAAAACTTCACTCCCTTCGCCCCCTATGGCCCTCGTGGCATCTTCGTAGCCTCAGCCGTTTTGTTCTTTGCATACGTTGGATTCGACGCTGTTTCGACAATGGCTGAGGAAACTAAGAACCCTGCTAAAGATATACCTATTGGTCTTGTTGGATCAATGGTGATCACCACATNAGTTACGTTGTGTTTGATGCAGCCGTACCAACAAATTGATGAGGATGCGCCGTTTTCAGTGGCTTTTGAGGCTGTTGGATGGGGTTGGGCTAAGTACATTGTCGCTGTTGGTGCTATTAAAGGCATGACCACCGTGTTGTTGGTTAGTGCTGTTGGACAGGCGCGCTATCTCACGCACATTGCCAGAACCCACATGATCTCACCATGGTTTGCCAAAGTGCATGAAAGGACTAGCATTCCAGTGAATGCAACAGCCACCATGCTCGCTGCAACAGCAATAATCGCCTTCTTTACAAGCTTGGGAATTCTCTCAAATCTCCTCTCTATCTCCACCCTCTTCATCTTCATGCTGGTAGCCGTTGGCCTGATCGTCCGACGCTACTACGTCAGCGGTGAAACAACACCATCCGACCGAAACAAGCTCATAATTTGCATGGTTCTAATCCTCGGATCTTCAATAGCAACCGCCGTATACTGGAGCTCGAGCGATGGCTGGATCGGCTTGGTTGTTTCCAATTCCATATGGTTTCTCTCAACTCTGGTCCTATGGCTCGGTGTCCCACAGGCCAAAAAGCCTCGCGTGTGGGGCGTGCCGCTCGTCCCATGGGTGCCTTCACTGTCGATCGCCATCAACCTTTTCCTTCTTGGGTCGATCGACAAAGCTTCATTTGAAAGGTTTGGATTATGGACTGGGATCTTGTTGATTTACTATTTCTTGATTGGATTACATGCTTCTTATGACTCGGTCATGGAGTCCAAGACTGAAGCCGTACGAGTTAATAACCGTGTGTGA 1719 50.26 MPMVEEGIRRRSCGCSKEDFLPEESFKSWRNYSKALKATPTRLLDRLTARSGEHTKLVEMKARSQHEMKKSLTWWDLMWFGIGAVIGAGIFVLTGLETKKHAGPAIVLSYVVSGVSAMLSVFCYTEFAVEIPAAGGSFAYLRVELGDFMAFITAGNILLEYVIGGAAVARSWTSYFATLCNHHPNDFRIHVSSFPDDYNQLDPIAIVVIIVICTLAVASTKGSSRFNYIASIFHVVIILFIIIAGLTKANPKNFTPFAPYGPRGIFVASAVLFFAYVGFDAVSTMAEETKNPAKDIPIGLVGSMVITTXVTLCLMQPYQQIDEDAPFSVAFEAVGWGWAKYIVAVGAIKGMTTVLLVSAVGQARYLTHIARTHMISPWFAKVHERTSIPVNATATMLAATAIIAFFTSLGILSNLLSISTLFIFMLVAVGLIVRRYYVSGETTPSDRNKLIICMVLILGSSIATAVYWSSSDGWIGLVVSNSIWFLSTLVLWLGVPQAKKPRVWGVPLVPWVPSLSIAINLFLLGSIDKASFERFGLWTGILLIYYFLIGLHASYDSVMESKTEAVRVNNRV 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6492672 6494699 + Cp4.1LG09g07150.1 Cpe09g00714 475080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00714 572 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 8 565 - -
Cpe09g00714 572 PIRSF AA_transporter 50 475 - -
Cpe09g00714 572 PIRSF AA_transporter 449 571 - -
Cpe09g00714 572 Gene3D Amino acid/polyamine transporter I 66 498 - -
Cpe09g00714 572 PANTHER CATIONIC AMINO ACID TRANSPORTER 1 8 565 - -
Cpe09g00714 572 Pfam Amino acid permease 72 436 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cpe09g00714 572 Pfam C-terminus of AA_permease 504 554 IPR029485 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00969 Cpe-Chr2:8588483 Cpe09g00714 Cpe-Chr9:6492672 1.15E-171 dispersed
Cpe09g00714 Cpe-Chr9:6492672 Cpe20g00559 Cpe-Chr20:3306697 0 dispersed
Cpe09g00714 Cpe-Chr9:6492672 Cpe09g00731 Cpe-Chr9:6716430 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00714 K03294 - csv:101212046 957.207