Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00738 ATGTTAGAAGAGCTCGCTCGAGGATCAGACGCGGAGTTAGGTTACGAAGCAGCTGTTAATTCGAATTCGAGTCAGAACTCTATGAGTAGTGAAAGTTGTAGTAGCTTCAGTCGTCTCTCGTTTGATGCTGCGGTTGATTTTCCTACCTCCCGATTCTCGCCGGGGAGTCTCGATTTGAAGCCTCATCGATCGTCTGATTTCGCTTACTCCGCCATTCGTCGACGGAAATCCAAGCTTACTTTCCGTGATTTTCGGCTTCTTCGTCGCATCGGCGCTGGCGACATTGGTACGGTTTATCTATGCCAGTTGCGGAAATTGACCGACGGTGGCTATGACGATGAAGATGACGATTCGTGTTTGTACGCAATGAAAGTGGTGGATAAAGAAGCGTTGGAATTGAAGAAGAAGGTGCAGAGGGCGGAAATGGAGAGAAAAATATTGAAGATGCTCGATCATCCGTTTTTGCCTACTCTTTACGCTGAGTTTGAGGCGTCTCATTTCTCTTGCATCGTCATGGAGTTCTGTTCCGGCGGTGACTTGCATTCTCTCCGCCATAGACAGCCGCGTAAACGCTTCTCTCTCAGCTCCGCAAGGTTTTATGCTGCTGAAGTTCTCGTTGCTTTAGAGTACCTTCACATGCTTGGAATCATCTACAGAGACCTTAAGCCGGAGAATGTCCTTGTCCGATCGGACGGTCACATCATGCTGTCGGATTTCGATCTATCTCTCTGCTCCGACGCCACTCCGGCTGTTGAATCGCCGGATTCCTCCCCAAATCCTGCATTCCCCGATGCGATGGCGTCCCCCAAAACCAACACTGCATCCACCGCCTCCGCCGCTACTACCAGCCCTTTTTCCTGCTTCTACAATCGGCTTTTCCGGTCACGGAAGGTCCAAACCCTGACCCCGAACTGGCTCTTCGTTGCTGAACCCGTCTCTGCTCGGTCCTGCTCCTTTGTCGGTACTCACGAGTATGTCTCGCCGGAAGTTGCCGCTGGCGGGTCACACGGCAACGCTGTTGACTGGTGGGCTTTTGGCGTATTTCTCTATGAGTTGATCTTCGGCCGGACGCCGTTTGCAGCTTCATCCAATGAGACAACGCTAAGAAACATCATTAAGAAGCCGTTGACGTTTCCGACCGCCGAGACATCCGGCGCGCTTGAGCACCACGCGCGGGATCTAATATCCGGTTTGCTCAACAAGGACCCGACCCGGAGATTGGGTTCAAAACGCGGGTCTGCCGACATTAAGAAGCATCCATTCTTCAAAGGCCTTAACTTCGCTCTCATTCGGTCTCTCACGCCGCCAGAGGTCCCCGGCGTACGACGGTGGAAGGCGACGCCGGTGGCCAAATCCATGGAAAAGGCAGCTGATTCGGGCGGGTTCGATTACTTCTGA 1398 52.58 MLEELARGSDAELGYEAAVNSNSSQNSMSSESCSSFSRLSFDAAVDFPTSRFSPGSLDLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRKLTDGGYDDEDDDSCLYAMKVVDKEALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPRKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPDSSPNPAFPDAMASPKTNTASTASAATTSPFSCFYNRLFRSRKVQTLTPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGVFLYELIFGRTPFAASSNETTLRNIIKKPLTFPTAETSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEVPGVRRWKATPVAKSMEKAADSGGFDYF 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6818279 6820998 + Cp4.1LG09g07350.1 Cpe09g00738 475104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00738 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Cpe09g00738 465 CDD STKc_phototropin_like 82 443 - -
Cpe09g00738 465 Gene3D Transferase(Phosphotransferase) domain 1 315 440 - -
Cpe09g00738 465 PANTHER FLIPPASE KINASE 1-RELATED 2 447 - -
Cpe09g00738 465 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 2 447 - -
Cpe09g00738 465 ProSiteProfiles Protein kinase domain profile. 84 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00738 465 MobiDBLite consensus disorder prediction 250 277 - -
Cpe09g00738 465 Pfam Protein kinase domain 316 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00738 465 Pfam Protein kinase domain 85 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00738 465 SMART serkin_6 84 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00738 465 Coils Coil 123 150 - -
Cpe09g00738 465 Gene3D Phosphorylase Kinase; domain 1 82 174 - -
Cpe09g00738 465 Gene3D Transferase(Phosphotransferase) domain 1 175 242 - -
Cpe09g00738 465 SUPERFAMILY Protein kinase-like (PK-like) 66 438 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00738 Cpe-Chr9:6818279 Cpe10g01239 Cpe-Chr10:9546367 1.17E-136 dispersed
Cpe09g00738 Cpe-Chr9:6818279 Cpe11g01082 Cpe-Chr11:9033317 7.00E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62607 PF00069 Pkinase 2.00E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00738 - - csv:101208129 748.814