Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00783 ATGCTGTCAAACAACCATAACAACAGTCCTCCTACTCCTAGAACCAGATTGGAAAGGCTTCTTAGGGAGAGAGAGCTCAGGAGATCAAACCGGTCTTCTCTCAATGAAGAAGCTCACAGTCTGGGAGAATTCAACAGTTATGATCTGTTCTCTTTTTCTGGTGATAGTTGTGGGTCATTTAACGAGGAAGATATCTTAGAAGGGGTGTCAGTGGTAAAAGACATCATTGATGGGTTTCAAAGGCTAGAAGGGAGGACTTCTAAACAGCGCCTTCTAGTTGTAGCAAACAGATTGCCTGTGTCTGCTGTCAGGAAAGGGAAGGAGACATGGCATCTTGAAATTAGCGTTGGTGGTTTAGTCAGTGCACTTTTAGGACTAAAGGAGTTTGAGGCAAGATGGATTGGTTGGGCTGGTGTGAACGTACCTGACGAAGTCGGACAGAGAGCCCTAGAGAAAGCATTAGCTGAAAAGAAATGCATACCGGTCTTTCTTGATGAAGAGATCGTTCATCAGTATTACAATGGCTACTGTAACAACATATTGTGGCCTCTATTTCATTATCTTGGTCTTCCACAAGAAGACCGCCTTGCAACAACACGGAGTTTTCAGTCACAGTTTGATGCATATAAGAAGGCTAACAAAATGTTTGCTGATGTTGTAAACAAACATTATGAAGAGGGAGATGTTGTTTGGTGTCATGATTATCACTTGATGTTTCTCCCAAAATGTCTCAAAGAGCATAATCGTAAGATGAAAGTTGGTTGGTTCCTTCACACCCCATTTCCATCGTCAGAAATACATAGAACTCTACCATCTCGGTCAGAGCTTTTGAGAGCGGTTCTTGCTGCTGATTTAGTTGGTTTCCACACATATGATTATGCCAGGCATTTTGTTAGTGCCTGCACCCGTATTCTTGGGTTGGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAACTGACTCGCATAGCTGCTTTTCCTATTGGAATAGATTCTGATCGATTCATTCGAGCTCTTAAACTTCCTCAAGTCCAGGATCACATTAAAGAACTTCAAGAAAGATTTGCTGGACGAAAGGTAATGTTGGGTGTTGATCGTCTTGATATGATTAAGGGAATACCCCAAAAGATTCTGGCTTTTGAAAAATTTCTTGAAGAAAATCCAAAGTGGCGCGATAAAGTAGTTTTGCTGCAAATTGCTGTGCCAACAAGGACAGACGTTCCTGAGTATCAAAAGCTAACAAGTCAAGTTCATGAGATTGTTGGGCGTATTAATGGGAGGTTTGGCACTCTTACTGCAGTTCCAATACATCATCTGGATCGTTCACTTGACTTCCCTGCATTATGTGCTTTATATGCTGTCACTGATGTGGCACTAGTTACATCTTTAAGAGATGGAATGAATCTTGTGAGCTATGAGTTTGTTGCCTGTCAAGCTTCCAAGAAAGGTGTTCTTATTCTGAGTGAGTTTGCTGGTGCAGCACAGTCATTAGGTGCTGGTGCTGTTTTAGTTAATCCATGGAATATCACTGAAGTTGCTGCTTCAATTGGTTATGCTTTGAATATGGAAGCTGATGAAAGAGAAAGGCGACACCTTCATAACTTCATGCACGTTACAACTCACACATCCCAAGAATGGGCTGCAACATTTGTAAGCGAACTTAACGACACCGTAGTTGAAGCTCAGATCAGGACCAGACAGATACCACCTTTACTTCCAATTAATGAGGCAGCGAACAGTTATTCGCGATCACATAATCGATTGGTTATCCTGGGTTTCAATGCTACCTTAACTGAAGCAGTTGATGCCCTCGGAAGAAGATGTGGCCAAATTAGAGACATGGACCTTAAAGTACATCCAGATGTGAGAGAGCCCTTGAAGAAGCTTTGTGATGACCGGAATACGACAGTGGTTGTCCTTAGTGGGAGCGACCGAAGTGTTCTAGACGAGAATTTTGGTCAGTACAACATGTGGCTGGCAGCAGAAAACGGTATGTTCTTACGTCCTACGAAGGGAGAATGGATGACGACTATGCCCGAGAATTTACATATGGACTGGGTTGAGAGTGTTAAGCATGTTTTCGAGTATTTTACCGAAAGAACTCCTAGATCCCATTTTGAGCTTCGTGAAACTTCGCTGGTGTGGAATTACAAATATGCAGATGTTGAGTTTGGAAGACTTCAAGCCAGGGACTTGTTGCAGCATCTATGGACTGGTCCAATCTCAAATGCATCAGTTGATGTTGTCCAAGGCAGTCGATCAGTCGAGGTTCGAGCAGTCGGTGTTACAAAGGGTTCCGCCATTGATCGAATATTGGGAGAAATAGTTCGTGACAAAGGCATCAACAAGCCTATTGACTATGTTCTCTGTGTTGGGCACTTCCTAGCCAAGGATGAAGATGTGTATACATTTTTCGAGCCCGACCTTCCTTCTGAAGTGCCACAAACAGTCCCGAATCCTTTACCACCGCCGAAGATGCCAAACAATGGAGCCCCACCGCCGAAGTCGGCACGCCTGAAGAAACAACGTTCCCTTTCCATTATAGAAAGAAGAGCAAACAGCCATGGGAGTGCAGTGTTTTGGAGGCCTGTAGTGCAGGATCGATTGTCACTGCATGAGGGTTCATCTGTTCTTGATCTCAAGGGTGACAATTACTTCTCGTGTGCCGTGGGGCGAAAGCGATCGAACGCAAGATATCTTCTTGTTTCGTCGAATGATGTTGTCAAACTTGTGAAGGAGTTGTCGGAATGTTTGGAGTCAAGTGTGAGTTGA 2772 43.69 MLSNNHNNSPPTPRTRLERLLRERELRRSNRSSLNEEAHSLGEFNSYDLFSFSGDSCGSFNEEDILEGVSVVKDIIDGFQRLEGRTSKQRLLVVANRLPVSAVRKGKETWHLEISVGGLVSALLGLKEFEARWIGWAGVNVPDEVGQRALEKALAEKKCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANKMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPIGIDSDRFIRALKLPQVQDHIKELQERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPKWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIGYALNMEADERERRHLHNFMHVTTHTSQEWAATFVSELNDTVVEAQIRTRQIPPLLPINEAANSYSRSHNRLVILGFNATLTEAVDALGRRCGQIRDMDLKVHPDVREPLKKLCDDRNTTVVVLSGSDRSVLDENFGQYNMWLAAENGMFLRPTKGEWMTTMPENLHMDWVESVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVRDKGINKPIDYVLCVGHFLAKDEDVYTFFEPDLPSEVPQTVPNPLPPPKMPNNGAPPPKSARLKKQRSLSIIERRANSHGSAVFWRPVVQDRLSLHEGSSVLDLKGDNYFSCAVGRKRSNARYLLVSSNDVVKLVKELSECLESSVS 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7260120 7268590 - Cp4.1LG09g07980.1 Cpe09g00783 475149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00783 923 Coils Coil 17 37 - -
Cpe09g00783 923 PANTHER GLYCOSYL TRANSFERASE, FAMILY 20, TREHALOSE-PHOSPHATASE, HAD-LIKE DOMAIN PROTEIN-RELATED 62 915 - -
Cpe09g00783 923 Gene3D Glycogen Phosphorylase B; 337 539 - -
Cpe09g00783 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 62 915 IPR001830 GO:0003824|GO:0005992
Cpe09g00783 923 Pfam Trehalose-phosphatase 614 813 IPR003337 GO:0003824|GO:0005992
Cpe09g00783 923 Pfam Glycosyltransferase family 20 90 555 IPR001830 GO:0003824|GO:0005992
Cpe09g00783 923 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 558 - -
Cpe09g00783 923 MobiDBLite consensus disorder prediction 813 831 - -
Cpe09g00783 923 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 90 555 IPR012766 GO:0003825|GO:0005992
Cpe09g00783 923 MobiDBLite consensus disorder prediction 813 836 - -
Cpe09g00783 923 Gene3D Glycogen Phosphorylase B; 82 336 - -
Cpe09g00783 923 SUPERFAMILY HAD-like 588 910 IPR036412 -
Cpe09g00783 923 CDD GT20_TPS 90 555 IPR001830 GO:0003824|GO:0005992
Cpe09g00783 923 CDD HAD_TPP 588 808 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00783 Cpe-Chr9:7260120 Cpe01g00950 Cpe-Chr1:5627484 1.03E-146 dispersed
Cpe15g00820 Cpe-Chr15:8155545 Cpe09g00783 Cpe-Chr9:7260120 2.17E-141 wgd
Cpe19g01083 Cpe-Chr19:7365597 Cpe09g00783 Cpe-Chr9:7260120 4.36E-135 wgd
Cpe02g00653 Cpe-Chr2:4020471 Cpe09g00783 Cpe-Chr9:7260120 0 wgd
Cpe04g00803 Cpe-Chr4:7586345 Cpe09g00783 Cpe-Chr9:7260120 2.23E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00783 K16055 - csv:101213690 1665.59