Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00795 ATGATGGTTTCTGATATCCCGATTTGCCACACTTGTGGTGAGCAAGTCGGAGTTGATACCAATGGAGAGGTTTTCGTTGCTTGCCATGAGTGCCAATTTCCCATTTGCAAAGTCTGCGTTCAGTATGATATCAAGGAAGGCCGCAATGTTTGCTTGCGGTGTGGCTCGCCATTTGACAAGAATTTACTGATGGATGATACAAAGACAACAGGAAATCAACACACCATGGCATCTCATCTCAGTCATTCTCAGGATGTTGGAGTTCATGCTAGACATGTCAGTAGCGTATCAACTGTGGATAGTGAATTGAATGATGAATCTGGGAACCCAATTTGGAAGAACAGAGTAGAGAGTTGGAAGGATAAGAAGAACAAGAAGAAAAGGTCTACTGTGAAGACAGAACAAGAAGCTCAAGTTCCACCCCAACAACAAATGGAAGAGAAACAGATTTCAGAGGAGGCTGTAGTTACACACTCATTCTCTTCAGTTTATCCGATTCCGTCGAGCAGATTAACACCATACAGAATAGTGATAATCATGCGATTGATCATTCTAGGTCTTTTCTTTCAATATAGGATTACAAATCCTGTTGATAGTGCTTTTGGTCTATGGCTCACTTCTATCATATGTGAAATCTGGTTCGCCTTCTCCTGGGTGTTGGATCAGTTCCCTAAATGGTTTCCTGTCTGCAGGGACACATTTATTGACAGATTATCAGCCAGGTTTGAAAGAGAGGGAGAACCTTCCCAGCTTGCCGCTGTGGATTTTTTTGTGAGTACCGTTGATCCTTTGAAAGAACCTCCTCTAATCACTGCGAATACCGTGCTTTCAATCCTTGCTGTGGACTATCCTGTCGATAAAGTCTCCTGCTATGTGTCCGATGACGGTGCAGCTATGCTCACGTTTGAATCTCTAGTTGAAACAGCTGACTTTGCAAGGAAATGGGTTCCATTCTGCAAAAAATTCTCCATTGAACCTCGAGCTCCTGAGTTTTACTTCTCCCAGAAAATAGACTATTTGAAAGATAAAGTACAACCTTCTTTTGTAAAGGAACGTAGAGCTATGAAAGCTCAAAAAACACCTGATGAAGGCTGGTCCATGCAAGATGGAACAGCTTGGCCAGGAAACAATCCACGTGATCACCCTGGAATGATTCAGGTTTTTCTTGGAAATACCGGCGCCCATGACGTAGAGGGAAATGAACTTCCTCGACTAGTCTACGTCTCCAGAGAGAAGAGGCCTGGTTACCAGCATCACAAAAAAGCTGGTGCTGAAAATGCTCTGGTAAGAGTATCTGCAGTCCTCACAAATGCCCCCTTCATTCTTAACCTTGACTGTGATCACTATGTTAACAATAGTCAAGCTATACGTGAGGCAATGTGTTTCTTGATGGACCCACAAGTTGGCCGAGATGTATGCTATGTTCAGTTTCCTCAGAGGTTTGATGGCATTGATCGAAGTGATCGATATGCCAATCGCAACACGGTTTTCTTCGATATCTCAAAAGATCCGACTGAGATTCAGAGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAACCTCAGGGAAATAGATAATTATGATGAGTATGAGAGATCAATGCTGATTTCTCAACTGAGCTTTGAGAAAACTTTCGGATTGTCGTCTGTGTTTATCGAGTCTACGCTAATGGAAAATGGCGGAGTTGCGGAATCTGCAAATCCCTCGACTTTGATCAAGGAAGCAATTCATATTGGTTGGATATATGGGTCAGTGACTGAGGATATCTTAACGGGTTTCAAGATGCATTGCCGAGGGTGGAGGTCCATCTACTGCATGCCATTTAGGCCAGCATTCAAAGGGTCCGCACCAATTAACCTTTCTGATCGTCTCCACCAAGTTCTTCGATGGGCACTTGGATCTGTTGAGATTTTTCTTAGCAGACACTGTCCATTATGGTATGGATTTGCAGGCGGCCGCCTCAAATGGCTCCAAAGAATGGCTTACATAAACACCATTGTCTATCCCTTCACCTCGCTCCCTCTTGTTGCTTACTGCTCATTGCCTGCAATCTGCCTGCTCACAGGAAAGTTCATCATTCCAACGCTCTCGAACCTAGCAAGTACCCTTTTTCTCGGTCTCTTCTTGTCCATCATTCTCACGAGTGTCCTCGAGCTGCGTTGGAGTGGTGTTAGCATCGAAGATATATGGCGTAACGAGCAATTCTGGGTAATCGGAGGCGTCTCGGCACATCTCTTTGCTGTCTTCCAAGGTTTCCTAAAGATGTTAGCTGGTGTCGACACCAACTTCACGGTTACAGCAAAGGCAGCCGAGGACTCCGAGTTTGGAGAGCTTTACATGGTGAAATGGACGACACTTCTGATCCCTCCGACAACCCTTATCGTCATCAACCTGGTTGGTGTCGTTGCGGGATTTTCTGATGCATTAAATGGTGGATATGAAGCATGGGGTCCTCTTTTTGGCAAGGTATTCTTTGCGTTTTGGGTGATTTTTCATCTCTATCCATTCCTCAAAGGTCTCATGGGTCGCCAGAACAGGACTCCAACCATTGTTGTTCTTTGGTCAGTGCTGTTGGCCTCAGTTTTCTCACTTGTTTGGGTGAAGATTAACCCATTTGTGAACCAGGTTGACAGTACAGCCGTTGCACAAAGCTGCATTGCTATAGATTGTTGA 2679 44.42 MMVSDIPICHTCGEQVGVDTNGEVFVACHECQFPICKVCVQYDIKEGRNVCLRCGSPFDKNLLMDDTKTTGNQHTMASHLSHSQDVGVHARHVSSVSTVDSELNDESGNPIWKNRVESWKDKKNKKKRSTVKTEQEAQVPPQQQMEEKQISEEAVVTHSFSSVYPIPSSRLTPYRIVIIMRLIILGLFFQYRITNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWFPVCRDTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDVEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAMCFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDISKDPTEIQRDAKREELDAAIFNLREIDNYDEYERSMLISQLSFEKTFGLSSVFIESTLMENGGVAESANPSTLIKEAIHIGWIYGSVTEDILTGFKMHCRGWRSIYCMPFRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKWLQRMAYINTIVYPFTSLPLVAYCSLPAICLLTGKFIIPTLSNLASTLFLGLFLSIILTSVLELRWSGVSIEDIWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAAEDSEFGELYMVKWTTLLIPPTTLIVINLVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVNQVDSTAVAQSCIAIDC 892
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7404230 7412062 + Cp4.1LG09g07870.1 Cpe09g00795 475161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00795 892 SUPERFAMILY RING/U-box 3 65 - -
Cpe09g00795 892 Pfam Cellulose synthase 506 882 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe09g00795 892 Pfam Cellulose synthase 254 501 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe09g00795 892 MobiDBLite consensus disorder prediction 123 146 - -
Cpe09g00795 892 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 506 892 - -
Cpe09g00795 892 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 2 501 - -
Cpe09g00795 892 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 387 522 IPR029044 -
Cpe09g00795 892 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 506 892 - -
Cpe09g00795 892 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 501 - -
Cpe09g00795 892 Pfam Zinc-binding RING-finger 7 60 IPR027934 -
Cpe09g00795 892 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Cpe09g00795 892 SUPERFAMILY Nucleotide-diphospho-sugar transferases 268 685 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00795 Cpe20g00474 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00795 Cpe-Chr9:7404230 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe20g00474 Cpe-Chr20:2736791 Cpe09g00795 Cpe-Chr9:7404230 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00795 K10999 - pop:7470198 1535.39