Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00800 ATGGAGAAAAAGGGTACCATTTTAATGCAAAGATATGAGCTTGGGAGGCTTCTTGGACAGGGAACTTTCGCCAAAGTCTACCATGCTCGTAATCTCAAGTCAGGCCAGAGCGTGGCGATTAAGATTATTGATAAAGAGAAAGTGCTGCGTGGTGGGTTGATCGATCAAATCAAGAGGGAAATCTCTGTGATGCGCCTTGTCCGCCATCCTAATGTGGTGCAGCTGTATGAGGTGATGGCTAGCAAGACCAAGATCTATTTTGCCATGGAGTTTGTCAAAGGTGGGGAGCTTTTTAACAAAGTGGCTCGAGGGAAGCTCAAGGAAGATGCTGCTCGTAAGTACTTTCAGCAGCTCATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTATCATAGAGATATCAAGCCTGAGAATCTCCTTCTTGATGAGTTTGGGAATCTTAAGATTTCTGATTTTGGGTTGAGTGCTTTGGCTGAGTCTAGACGCCAAGATGGGCTTCTTCATACCACTTGTGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTCCTGTTTGTTCTTCTAGCTGGTTATCTCCCTTTCAACGAACAAAATCTAATGGAAATGTACAAAAAAATCACCAGAGGAGAATTCAAATGCCCTCATTGGTTTCCCCCAGAAGCTCGCAAGCTCCTCTCAAGAATCCTCAATCCATGTCCTTTCACAAGAATAAACATGGCCACACTCATGGAAAATTCCTGGTTCAAAAAGGGTTTCAAGGCCAATGTAGCAACTCCAAAACCCCTTCAAATCAAAGGCCACGTCTCGTCTATAAACGATGTCGAGGTCGCTTTAGACGAGGGAAGCTCTGTTAGTAACAGCAGCATTGAGAGTGGAAGGCCACCAACAAGAACTAATTCCTTCAATGCATTTGATATCATATCCCTCTCACAAGGTTTTGATCTCTCAGGTTTGTTTGAGAATGATATGAATGAGAGGCCACCGACACGGTTCACGACGACGAAACCAGCATCGACGATCGTGTCGAAGTTTGAAGAGATAGCAGAGATGGAGAGGTTCAAAGTGATGAAGAAAGATGGGATGGTGAAACTCCAGGGAAGTAAACAAGGAAGAAAAGGGCAGTTGGGTATTGATGCTGAGATATTTGAAGTGACACCTTCTTTTTTTGTGGTGGAGGTCAAGAAAACTGCAGGAGACACCTTGGAATACAAGCAATTTTACAACAAAGACATGAAGCCTTGCCTTAAGGACATCGTGTGGGCTTGGGAAGGAAACGAGCAACAACAGCAACAACAGCAACAGCAGCCGCAGCCGCAGCTCCAAAATAGATAA 1344 44.49 MEKKGTILMQRYELGRLLGQGTFAKVYHARNLKSGQSVAIKIIDKEKVLRGGLIDQIKREISVMRLVRHPNVVQLYEVMASKTKIYFAMEFVKGGELFNKVARGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGYDGAKADIWSSGVVLFVLLAGYLPFNEQNLMEMYKKITRGEFKCPHWFPPEARKLLSRILNPCPFTRINMATLMENSWFKKGFKANVATPKPLQIKGHVSSINDVEVALDEGSSVSNSSIESGRPPTRTNSFNAFDIISLSQGFDLSGLFENDMNERPPTRFTTTKPASTIVSKFEEIAEMERFKVMKKDGMVKLQGSKQGRKGQLGIDAEIFEVTPSFFVVEVKKTAGDTLEYKQFYNKDMKPCLKDIVWAWEGNEQQQQQQQQQPQPQLQNR 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7438499 7441413 - Cp4.1LG09g07970.1 Cpe09g00800 475166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00800 447 Gene3D Transferase(Phosphotransferase) domain 1 3 305 - -
Cpe09g00800 447 Gene3D Kinase associated domain 1, KA1 306 425 - -
Cpe09g00800 447 SMART serkin_6 12 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00800 447 Pfam Protein kinase domain 12 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00800 447 ProSiteProfiles Protein kinase domain profile. 12 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00800 447 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 2 436 - -
Cpe09g00800 447 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Cpe09g00800 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Cpe09g00800 447 Pfam NAF domain 303 361 IPR004041 GO:0007165
Cpe09g00800 447 CDD CIPK_C 306 420 - -
Cpe09g00800 447 PANTHER - 2 436 - -
Cpe09g00800 447 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Cpe09g00800 447 SUPERFAMILY Protein kinase-like (PK-like) 8 304 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00800 Cpe20g00467 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00128 Cpe-Chr8:840252 Cpe09g00800 Cpe-Chr9:7438499 9.31E-81 dispersed
Cpe09g00800 Cpe-Chr9:7438499 Cpe10g00992 Cpe-Chr10:5638980 0 dispersed
Cpe20g00467 Cpe-Chr20:2703149 Cpe09g00800 Cpe-Chr9:7438499 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62611 PF00069 Pkinase 1.60E-58 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00800 K07198 - csv:101206082 729.939