Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00800 | ATGGAGAAAAAGGGTACCATTTTAATGCAAAGATATGAGCTTGGGAGGCTTCTTGGACAGGGAACTTTCGCCAAAGTCTACCATGCTCGTAATCTCAAGTCAGGCCAGAGCGTGGCGATTAAGATTATTGATAAAGAGAAAGTGCTGCGTGGTGGGTTGATCGATCAAATCAAGAGGGAAATCTCTGTGATGCGCCTTGTCCGCCATCCTAATGTGGTGCAGCTGTATGAGGTGATGGCTAGCAAGACCAAGATCTATTTTGCCATGGAGTTTGTCAAAGGTGGGGAGCTTTTTAACAAAGTGGCTCGAGGGAAGCTCAAGGAAGATGCTGCTCGTAAGTACTTTCAGCAGCTCATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTATCATAGAGATATCAAGCCTGAGAATCTCCTTCTTGATGAGTTTGGGAATCTTAAGATTTCTGATTTTGGGTTGAGTGCTTTGGCTGAGTCTAGACGCCAAGATGGGCTTCTTCATACCACTTGTGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTCCTGTTTGTTCTTCTAGCTGGTTATCTCCCTTTCAACGAACAAAATCTAATGGAAATGTACAAAAAAATCACCAGAGGAGAATTCAAATGCCCTCATTGGTTTCCCCCAGAAGCTCGCAAGCTCCTCTCAAGAATCCTCAATCCATGTCCTTTCACAAGAATAAACATGGCCACACTCATGGAAAATTCCTGGTTCAAAAAGGGTTTCAAGGCCAATGTAGCAACTCCAAAACCCCTTCAAATCAAAGGCCACGTCTCGTCTATAAACGATGTCGAGGTCGCTTTAGACGAGGGAAGCTCTGTTAGTAACAGCAGCATTGAGAGTGGAAGGCCACCAACAAGAACTAATTCCTTCAATGCATTTGATATCATATCCCTCTCACAAGGTTTTGATCTCTCAGGTTTGTTTGAGAATGATATGAATGAGAGGCCACCGACACGGTTCACGACGACGAAACCAGCATCGACGATCGTGTCGAAGTTTGAAGAGATAGCAGAGATGGAGAGGTTCAAAGTGATGAAGAAAGATGGGATGGTGAAACTCCAGGGAAGTAAACAAGGAAGAAAAGGGCAGTTGGGTATTGATGCTGAGATATTTGAAGTGACACCTTCTTTTTTTGTGGTGGAGGTCAAGAAAACTGCAGGAGACACCTTGGAATACAAGCAATTTTACAACAAAGACATGAAGCCTTGCCTTAAGGACATCGTGTGGGCTTGGGAAGGAAACGAGCAACAACAGCAACAACAGCAACAGCAGCCGCAGCCGCAGCTCCAAAATAGATAA | 1344 | 44.49 | MEKKGTILMQRYELGRLLGQGTFAKVYHARNLKSGQSVAIKIIDKEKVLRGGLIDQIKREISVMRLVRHPNVVQLYEVMASKTKIYFAMEFVKGGELFNKVARGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGYDGAKADIWSSGVVLFVLLAGYLPFNEQNLMEMYKKITRGEFKCPHWFPPEARKLLSRILNPCPFTRINMATLMENSWFKKGFKANVATPKPLQIKGHVSSINDVEVALDEGSSVSNSSIESGRPPTRTNSFNAFDIISLSQGFDLSGLFENDMNERPPTRFTTTKPASTIVSKFEEIAEMERFKVMKKDGMVKLQGSKQGRKGQLGIDAEIFEVTPSFFVVEVKKTAGDTLEYKQFYNKDMKPCLKDIVWAWEGNEQQQQQQQQQPQPQLQNR | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7438499 | 7441413 | - | Cp4.1LG09g07970.1 | Cpe09g00800 | 475166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00800 | 447 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 305 | - | - | |
Cpe09g00800 | 447 | Gene3D | Kinase associated domain 1, KA1 | 306 | 425 | - | - | |
Cpe09g00800 | 447 | SMART | serkin_6 | 12 | 252 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00800 | 447 | Pfam | Protein kinase domain | 12 | 252 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00800 | 447 | ProSiteProfiles | Protein kinase domain profile. | 12 | 252 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00800 | 447 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 | 2 | 436 | - | - | |
Cpe09g00800 | 447 | ProSitePatterns | Protein kinases ATP-binding region signature. | 18 | 41 | IPR017441 | GO:0005524 | |
Cpe09g00800 | 447 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe09g00800 | 447 | Pfam | NAF domain | 303 | 361 | IPR004041 | GO:0007165 | |
Cpe09g00800 | 447 | CDD | CIPK_C | 306 | 420 | - | - | |
Cpe09g00800 | 447 | PANTHER | - | 2 | 436 | - | - | |
Cpe09g00800 | 447 | ProSiteProfiles | NAF domain profile. | 300 | 324 | IPR018451 | GO:0007165 | |
Cpe09g00800 | 447 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 304 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g00800 | Cpe20g00467 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00128 | Cpe-Chr8:840252 | Cpe09g00800 | Cpe-Chr9:7438499 | 9.31E-81 | dispersed | |
Cpe09g00800 | Cpe-Chr9:7438499 | Cpe10g00992 | Cpe-Chr10:5638980 | 0 | dispersed | |
Cpe20g00467 | Cpe-Chr20:2703149 | Cpe09g00800 | Cpe-Chr9:7438499 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62611 | PF00069 | Pkinase | 1.60E-58 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00800 | K07198 | - | csv:101206082 | 729.939 |