Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00808 ATGATTCCTTGCCCAAGATGCAAAAGCCCCGACACCAAATTTTGTTATTTCAATAACTACAACGTTAATCAGCCAAGACATTTCTGTAAGGGCTGCCAGAGATACTGGACGGCCGGTGGCGCCCTCCGCAACGTCCCCGTCGGAGCCGGCCGCCGGAAAACCAAACCTCCTTGTCGGACCTTTGATGGGTTGCCGGAGAATTGTGTCTTTGATTCTTCAGGGATGGTGGCGGTGCAGCCGTTTGAGTTGGAGGAGTGGCACGGTGGTTTCAACCAAATTTCACCGGTGAAGCGGCGGAGAGATTGCCAAGATGGTCAAACTTGTTGA 327 52.6 MIPCPRCKSPDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFDGLPENCVFDSSGMVAVQPFELEEWHGGFNQISPVKRRRDCQDGQTC 108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7508869 7509195 + Cp4.1LG09g08060.1 Cpe09g00808 475174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00808 108 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 1 101 - -
Cpe09g00808 108 Pfam Dof domain, zinc finger 2 55 IPR003851 GO:0003677|GO:0006355
Cpe09g00808 108 ProSitePatterns Zinc finger Dof-type signature. 4 40 IPR003851 GO:0003677|GO:0006355
Cpe09g00808 108 ProSiteProfiles Zinc finger Dof-type profile. 2 56 IPR003851 GO:0003677|GO:0006355
Cpe09g00808 108 PANTHER CYCLIC DOF FACTOR 2 1 101 IPR045174 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00808 Cpe20g00461 CCT
Cpe09g00808 Cpe19g01067 CCT
Cpe09g00808 Cpe10g00145 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00808 Cpe-Chr9:7508869 Cpe20g00016 Cpe-Chr20:95532 9.23E-31 dispersed
Cpe10g00145 Cpe-Chr10:906579 Cpe09g00808 Cpe-Chr9:7508869 2.83E-39 wgd
Cpe19g01067 Cpe-Chr19:7305124 Cpe09g00808 Cpe-Chr9:7508869 8.08E-41 wgd
Cpe20g00461 Cpe-Chr20:2663589 Cpe09g00808 Cpe-Chr9:7508869 1.28E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50023 PF02701 zf-Dof 3.70E-31 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00808 - - cmax:111490555 245.358