Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00837 ATGGAGGAAGATCCTAATTCTTGGTTAAGAAGAACCAAATTTTCCCACACAATTTGCTACCGTTTAGAGTCCTTACGATTGCCTTCCTTTCCTATCACATCTCCTTCTCGTCCTAAATCTACCCTTAACAAGCAGAGGTCTCTATCTCCACCTTCACAAACTACACTCTTAAGCACATTTAAGGATGCACGTAATGATTCGAAGCGATTTTCAACTCCGCAACCTTGTAGACGAGAGCCGAGAGAAGAGAAGGGTAAAAGTGTATTCAATAAAGAAGCTAAGGTGCATAATTCCTCAGAGGAAGAGAAGTTAAGAAGCCCTGTAAGGCATCTTGCATCATTTAAAGGCAATGAGAGATCCACGTTCATGAAGGAGGGTTCTTGGACCAAATTGTTTGAACACAAAAGAGGGAAGGTCACTGCTGTTGATGCTGTTGATGAATTCTCTGTTGACTTGTCTAAGTTGTATTTTGGATTTAAATTTGCTTATGGAGCTCATAGTTGCCTTTACCACGGACTTTACTTCGACAAAGTTGTTGCTATTAAGGTCATCAATCTACCAAAACACGACGAAAATGGCGATCTTGCAGGTCGCATAACGAAGCAGTTTGGTCGGGAAGTAATTCTTTTATCTCGTCTTCATCATCCCAATGTTATTAAGTTGGTAGCAGCTTGCAGAAAGCCTGGTTATTGGATCATAACAGAGTATCTATCTCAAGGTTCGTTAAGGGCATATCTACACAAACTTGAAAACAAATCTCTACCACTTCAAAAACTGATTGCCATTGCATTGGACATTGCTCGTGGAATGGAATACATTCATTCGCAACGCATCATTCATCGAGATCTCAAACCCGAAAATGTTCTTATTGATCAAGACTTTTGTCTTAAGATTGCTGATTTCGGCATTGCTTGTGAGGAAGCACATTGTGATACACTGGCCGACGATCTCGGAACTTACCGTTGGATGGCTCCCGAGATGATCAAACGTAAACATTACGGACGGAAGGTCGATCTCTACAGCTTTGGACTTATCCTGTGGGAATTGGTGGCAGGAAGAATCCCATATGAGAATATGACTCCAATCCAAGCAGCTTATGCAGTTGTTAACAAGAATATCCGACCAGTCGTCCCGAGCGAGTGTCCTCCGGTGATGCGGGGATTGATCGAGCAATGTTTGTCGGTGCAACCAGCGAACCGGCCGGAGTTTTGGGAGGTGGTGAAAGTGCTAGAGCAAGTTGAGAGTTCAGTTGGGGGAGATGGGACATTGATGAATGTAGAGCAGAAGCCAAGTTGGGAAGTTCACAAGAAAGGTTTAAAGCATTGGATACAAAAGCTTGGTACTCATCATTCCCACACTTCTCTATCCTCCAAATCTAAATTCATATGA 1389 42.62 MEEDPNSWLRRTKFSHTICYRLESLRLPSFPITSPSRPKSTLNKQRSLSPPSQTTLLSTFKDARNDSKRFSTPQPCRREPREEKGKSVFNKEAKVHNSSEEEKLRSPVRHLASFKGNERSTFMKEGSWTKLFEHKRGKVTAVDAVDEFSVDLSKLYFGFKFAYGAHSCLYHGLYFDKVVAIKVINLPKHDENGDLAGRITKQFGREVILLSRLHHPNVIKLVAACRKPGYWIITEYLSQGSLRAYLHKLENKSLPLQKLIAIALDIARGMEYIHSQRIIHRDLKPENVLIDQDFCLKIADFGIACEEAHCDTLADDLGTYRWMAPEMIKRKHYGRKVDLYSFGLILWELVAGRIPYENMTPIQAAYAVVNKNIRPVVPSECPPVMRGLIEQCLSVQPANRPEFWEVVKVLEQVESSVGGDGTLMNVEQKPSWEVHKKGLKHWIQKLGTHHSHTSLSSKSKFI 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7723890 7726687 + Cp4.1LG09g08300.1 Cpe09g00837 475203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00837 462 Gene3D Phosphorylase Kinase; domain 1 144 238 - -
Cpe09g00837 462 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 435 - -
Cpe09g00837 462 MobiDBLite consensus disorder prediction 30 61 - -
Cpe09g00837 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Cpe09g00837 462 SUPERFAMILY Protein kinase-like (PK-like) 144 410 IPR011009 -
Cpe09g00837 462 CDD STKc_MAP3K-like 164 410 - -
Cpe09g00837 462 Pfam Protein tyrosine and serine/threonine kinase 176 410 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 MobiDBLite consensus disorder prediction 30 102 - -
Cpe09g00837 462 Gene3D Transferase(Phosphotransferase) domain 1 239 460 - -
Cpe09g00837 462 PRINTS Tyrosine kinase catalytic domain signature 234 247 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 PRINTS Tyrosine kinase catalytic domain signature 272 290 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 PRINTS Tyrosine kinase catalytic domain signature 318 328 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 PRINTS Tyrosine kinase catalytic domain signature 381 403 IPR001245 GO:0004672|GO:0006468
Cpe09g00837 462 MobiDBLite consensus disorder prediction 62 102 - -
Cpe09g00837 462 ProSiteProfiles Protein kinase domain profile. 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00837 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 435 - -
Cpe09g00837 462 SMART serkin_6 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00837 Cpe-Chr9:7723890 Cpe09g01031 Cpe-Chr9:9064342 1.44E-103 dispersed
Cpe10g00193 Cpe-Chr10:1119287 Cpe09g00837 Cpe-Chr9:7723890 0 wgd
Cpe19g01019 Cpe-Chr19:7105612 Cpe09g00837 Cpe-Chr9:7723890 0 wgd
Cpe20g00437 Cpe-Chr20:2510681 Cpe09g00837 Cpe-Chr9:7723890 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62613 PF07714 PK_Tyr_Ser-Thr 4.60E-57 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00837 - - csv:101222817 676.011