Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00840 ATGGCGGCTCTGAAACTCCCAATTCTTCTCCACTTCTTCTCCCTTCTTTTCTTCTCCATCTCCGCCGTCGATTTCGTCTTCAATGGCTTCAATTCCACCGATCTCTTCCTCTACGGCAACGCCACCGTCGAATCCCCTGTTCTTGCTCTCACAAACCAAACCAGTTTCTCAATCGGCCGCGCTCTGTACCCATCCAAAATCCCCACGAAAAACTCCAATTCCTCAACAGTTTTCCCTTTCTCCACTTCTTTCATCTTCGCCATGGCTCCTTTCAAGGATCTCCTCCCCGGTCATGGCTTCGTTTTCATCTTCGTTCCGGCCACCGGAATCTCCGGCACGGCCTCTGCTCAGAATTTAGGGTTTTTGAACTTCACGCTCAATGGAAACCCTAATAACCATGTTTTTGGAATTGAATTCGATGTGTTTGCTAATCCGGAGTTCAATGATCCCGATGATAATCATGTCGGAATTAATTTGAATTCCTTAACCTCTAACTTCACCGGAGTTGCTGGGTCTTGGTCTGACGGCGGCTCGTTCAGTAGTTTCCGGCTTAATAGCGGCGGAAACTACCAAGTCTGGGTTGATTATTCCGATTTTGAGATGAACGTTACGATGGCTCCGGCGGGGATGAAAAAGCCACGGCGGCCGTTGATTACCGCCTCCCTGAATCTCTCGGAGATTTTCTTAGACGAAATGTACGTGGGGTTCACGAGCGCCACCGGCCAGTTAGTTCAAGGCCACAACATCTTAGCTTGGAGTTTTAGCAACACCAATTTTTCATTAAGCGAGAGTTTGGTTACCATTGGATTGCCCTCCTTCCTTCTCCCAAAAGACCCATTTATGAAGTCGAAATGGTTCATCGCCGCCGTGACGGTTGGCGGATTTCTAGTTCTTTGTTTTATCGTTGGGACTTTGGGGATTTTGATCGCCGACCACCGGAGGAGAGCGAGGGCAAGAGCTGAAATGGAGGATTGGGAATTTGAGTATTGGCCGCATCGAATCACATATCAAGAACTTGAATCAGCGACGAAAGGATTTGGTGAAGAAAATGTGATCGGAATTGGAGGGAACGGGAAAGTTCATAAAGGGGTTTTGGCCGGAGGAGGTTTAGAAGTTGCAGTGAAGCGTATTTCTCATGAAAACGACGGGATGCGAGAGTTCATATCTGAAATCACGAGCATAGGGAGATTGAAGCATAGAAATCTTGTTAGTTTGCGAGGTTGGTGTAAGAAAGAGAAGGGAAATTTCTTACTGGTTTACGATTACATGGAAAATGGAAGCTTAGACAAATGGATATTCGATTGCGACGAGACAAACATGTTGAGCTACGATGATCGAATCAGAATATTGAAAAACGTAGCCTCAGGGGTGTTGTATTTACACGAAGGATGGGAATCAAAGGTTCTTCACAGGGACATAAAAGCGAGCAATGTGTTACTAGACAAGGACATGAATGGAAGGCTAGGAGATTTTGGGTTGGCTCGAGTCCACAGCCATGGCCAAGTGGCTAGCACGACTAGGGTTGTTGGGACGATGGGTTACATCGCACCTGAGTTGGTTCGAAGCGGACGAGCCTCAGCTCAATCAGACGTGTTTAGTTTTGGTGTCTTGATTCTAGAAGTGATGTGTGGGAGGAGACCAATTGAGAAAGGAAAGTCACTGTTACTAGATTGGGTTCGACGGTTGGATGTCGAAGGGGAGTTGACTGCAGCACTCGATGGGAGGTTGAAGAAGAAGGGCGGGTGGAATGAGGAGGAAGTGAAGAGAGTGCTGCATTTGGGATTGTTGTGTGCACACGTTAACCCGAACGCTCGACCAACGATGAGGCAAATAGTGAAAATTTTGGAAGGGAAGGTCGAGTTGGATGAGAACGAGAGCATAAACGCTTATTTGGTTCAAAGATTGAAATCACCCGGAATGTGGTGTGATTCAAGCGTTGGTTTTGGGCATACATTGCATCATCCAACTTTTGAGGATTTTCTTCACTCTTCTTCAACTTCCCTCTCTTGGTCAGCTTCGATCGCGGCTTCCGCTTCCACGTGA 2043 47.09 MAALKLPILLHFFSLLFFSISAVDFVFNGFNSTDLFLYGNATVESPVLALTNQTSFSIGRALYPSKIPTKNSNSSTVFPFSTSFIFAMAPFKDLLPGHGFVFIFVPATGISGTASAQNLGFLNFTLNGNPNNHVFGIEFDVFANPEFNDPDDNHVGINLNSLTSNFTGVAGSWSDGGSFSSFRLNSGGNYQVWVDYSDFEMNVTMAPAGMKKPRRPLITASLNLSEIFLDEMYVGFTSATGQLVQGHNILAWSFSNTNFSLSESLVTIGLPSFLLPKDPFMKSKWFIAAVTVGGFLVLCFIVGTLGILIADHRRRARARAEMEDWEFEYWPHRITYQELESATKGFGEENVIGIGGNGKVHKGVLAGGGLEVAVKRISHENDGMREFISEITSIGRLKHRNLVSLRGWCKKEKGNFLLVYDYMENGSLDKWIFDCDETNMLSYDDRIRILKNVASGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHSHGQVASTTRVVGTMGYIAPELVRSGRASAQSDVFSFGVLILEVMCGRRPIEKGKSLLLDWVRRLDVEGELTAALDGRLKKKGGWNEEEVKRVLHLGLLCAHVNPNARPTMRQIVKILEGKVELDENESINAYLVQRLKSPGMWCDSSVGFGHTLHHPTFEDFLHSSSTSLSWSASIAASAST 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7766419 7768461 - Cp4.1LG09g08460.1 Cpe09g00840 475206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00840 680 PANTHER - 15 671 - -
Cpe09g00840 680 SMART serkin_6 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00840 680 CDD lectin_legume_LecRK_Arcelin_ConA 23 257 IPR001220 GO:0030246
Cpe09g00840 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Cpe09g00840 680 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Cpe09g00840 680 Gene3D - 21 264 - -
Cpe09g00840 680 CDD STKc_IRAK 352 617 - -
Cpe09g00840 680 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Cpe09g00840 680 Gene3D Transferase(Phosphotransferase) domain 1 423 634 - -
Cpe09g00840 680 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Cpe09g00840 680 ProSiteProfiles Protein kinase domain profile. 346 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00840 680 Pfam Protein kinase domain 348 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00840 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 15 671 - -
Cpe09g00840 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Cpe09g00840 680 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00840 Cpe-Chr9:7766419 Cpe10g00899 Cpe-Chr10:5048944 8.83E-163 dispersed
Cpe15g00808 Cpe-Chr15:8086557 Cpe09g00840 Cpe-Chr9:7766419 0 wgd
Cpe20g00435 Cpe-Chr20:2503213 Cpe09g00840 Cpe-Chr9:7766419 0 wgd
Cpe04g00781 Cpe-Chr4:7448701 Cpe09g00840 Cpe-Chr9:7766419 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62614 PF00069 Pkinase 3.50E-48 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00840 - - csv:101222577 1058.51