Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00850 ATGGACTGCTTCGGCTCCTCTAATTTGGAGAAGAAGCGGATCTCTACTCGTGCTGATAAGGATTTGGACACTGACTTGCCTGAGAATGTTAAACAATTCTCCTTCAATGAATTAAGATCTGCTACAGAGGATTTCCATTCAAATAATAGAATTGGACGCGGAGGCTTTGGAGTTGTTTATAAGGGCGTGTTACGGAGAGGAGTACAAGTTGCAGTAAAGAAACTTTCTATAGAGTCTAAGCAAGGGGCTCGGGAATTTTTGACAGAGATCAAAACCATTTCAAATGTCAGGCATCCAAACCTTGTTGAGTTGATTGGATGCTGTGCTCAAAATGCTAACCGGATCTTGGTCTATGAATATCTGGAAAATAATAGTCTCGACCATGTTTTGTTAGAGTATAAGAACACGAGTGTTGAACTGGATTGGGGGAAGAGGTCCTCAATTTGCATTGGTACTGCTAGGGGCCTTCAATTTCTTCACGAGGAAGTCGTTCCACATATTGTGCATAGAGACATCAAGGCTAGTAATATACTCCTTGATAAGGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCTAAACTTTTCCCGGATGATATTACGCACATTAGCACAAGAATCGCAGGAACAACACTAGGAGATTATCCTCAGGAAGAAGTGCTTAGGTACATGAAAGTGGCTCTTTTCTGCACACAAGGGGCTGCAAGTCGACGGCCAGTGATGAGTCAAGTCGTCGACATGCTTACAAAGAAGATCAAGCTTAACGAGAAACTACTTACCGCACCGGGGTTCTACGGAGGCTCGAGTGACGTTCCTGGTAGTAGCAAGAAGACGATCTCCAGCACTTCCACTAGCAACACGGCTTGCTCTGCAGTCGTCTCTATAACTCAAATCACCCCTAGATGA 906 43.71 MDCFGSSNLEKKRISTRADKDLDTDLPENVKQFSFNELRSATEDFHSNNRIGRGGFGVVYKGVLRRGVQVAVKKLSIESKQGAREFLTEIKTISNVRHPNLVELIGCCAQNANRILVYEYLENNSLDHVLLEYKNTSVELDWGKRSSICIGTARGLQFLHEEVVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTLGDYPQEEVLRYMKVALFCTQGAASRRPVMSQVVDMLTKKIKLNEKLLTAPGFYGGSSDVPGSSKKTISSTSTSNTACSAVVSITQITPR 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7827082 7832230 + Cp4.1LG09g08450.1 Cpe09g00850 475216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00850 301 ProSiteProfiles Protein kinase domain profile. 45 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00850 301 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Cpe09g00850 301 SMART serkin_6 45 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00850 301 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 214 294 - -
Cpe09g00850 301 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 211 - -
Cpe09g00850 301 Gene3D Phosphorylase Kinase; domain 1 14 120 - -
Cpe09g00850 301 SUPERFAMILY Protein kinase-like (PK-like) 26 256 IPR011009 -
Cpe09g00850 301 Gene3D Transferase(Phosphotransferase) domain 1 121 212 - -
Cpe09g00850 301 PANTHER - 214 294 - -
Cpe09g00850 301 PANTHER - 2 211 - -
Cpe09g00850 301 Pfam Protein kinase domain 45 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00850 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00850 Cpe20g00356 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00655 Cpe-Chr2:4050510 Cpe09g00850 Cpe-Chr9:7827082 4.44E-12 dispersed
Cpe09g00850 Cpe-Chr9:7827082 Cpe15g00892 Cpe-Chr15:8578801 1.00E-63 dispersed
Cpe09g00850 Cpe-Chr9:7827082 Cpe09g00786 Cpe-Chr9:7283670 6.68E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62615 PF00069 Pkinase 2.00E-35 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00850 - - csv:101207026 375.555