Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00876 AACTCCATAGCAGACGATACCTTAAAACAAGGCCAATCCATTAACGATACCCAATCAATTGTCTCCGCCGCCGAGATATTTGAATTGGGATTCTTCAGTCAACCCCAAGCCACAAATTTGAAGTATTTAGCAATATGGTACAAGGGCGTCACTCCCAAAACTGTCGTTTGGGTGGCAAACAGAGATACCCCTGTTTTAAGCTCCTCTGCCACTTTAAACTTCAGAAGAGATGGAAATTTGGTTCTTATGAATCAAACAGGCGCAGCTTTTTGGTCGTCAAATTCGACAAAATCAATTCAAAATCCAATAGCTCAGCTGCTTGACACTGGAAATCTGGTTTTGAGAGATTCAAAATCAGAAGATTATGTGTGGCAGAGTTTTGATTATCCGACTGATACTCTGTTACCGGGTATGAAAATTGGGTGGGACTCCAAAACGGGTCTGAATCGAAAGCTAAAATCATGGACAAGTTCAAACGATGTGTCCTCGGGAGAATTCAGTTTTAGCCTCAACACAAATGGGCTTCCTCAATTCTTTGTTCATAAAGGAAACAGAACAATGTTTAGAGGTTGGCCTTGGTTCGATCATGATTTTGGGCAGAGTTATGGTAATGGGTTCAATTACGATCTTGTCTTTGATGCTTCAACAGAGATATCATTTTCATATAACGATTCAGCGCATAGCCGTACGAGAATTGTGATGGATTCAAGTGGGTCAATTCTTCGGCATGAATGGAACGATGAGGGAGAAAAATGGCGAAAAGCATACTCATTTGATGGAGCTGGCTGCAATGACTACGATTTGTGTGGGAATTTTGGTCTCTGTAATCCCGCAGTGACAACAAGTTGTGGTTGTTTAAATGGGTTTGAACAAATATCAACAAAAAACTTGTCAAATGGGTGTGTTAGAAGGGATCCAAAGATCTGCGAAGCTGGAGATGGGTTTATAAAGATAAGCAAAGTGAAATGGCCTGATTCTACAGGGGATTCTGTGAAAATGAAACTGGGTGTTAAAGATTGTGAGGCAGAGTGCTTGAAGGATTGCGGTTGTTTAGCGTATGGAACAGTGCAAATTCCTAAAATTGGGCTTGCCTGTGTCAATTGGTTTCACAAATTGGTTGATATTCGTTATGTTCCTGATGTTGGGTCGGGAGATGATATCTATGTGAGAGTTGCTGCTTCAGAATTAGAATCAGCTGATGAAAAGCGTAGTGTTGCAGTGGTTGTGGCTGTGCCGATTGTATCAGTGATAGCCTTTTTGGTTCCTCCAATTCAAGAACATGAACTAGAGATACCCATTGGCGTTCTTGAGGCAGCTACTGAAAATTTCTCTGTTTTTAATAAGATAGGAGAGGGTGGTTTTGGGTCAGTTTACAAGGGAAAGCTCCCAAATGGGCAAGAAATTGCAGTAAAAAAGCTAGCAGAAACATCAGGTCAAGGGTTGCAGGAGTTCAAAAACGAGGTCCTTTTCATTTCTCAGCTACAACATCGAAATCTTGTCAAGCTTCTTGGTTTTTGCATCCACAATGAACAAATTTTACTCATTTATGAGTATTTGCCTAACAAAAGTTTGGATTGTTTCATTTTTGGTTGGTATCAAGCAATCCTTCATTTACAATTACTGAAGTCTGATGTTTTTAGCTTTGGAGTGATGGTTCTCGAAATCGTTAGTGGTAAGAAGAACAAAGGGTTTTTTCATCCCGAGCATCAACTCAATCTTCTTGGACATGCATGGAATCTTTGGAAGGAAGGAAGGAGCTTGGAATTAATAGATGTAATATTGGAGGATCAATTTGATGAACATGAAGCTTTGAGATATATAAATATTGGGTTGTTGTGTGTTCAAAGACGTCCAGAAGACAGGCCAATCATGTCGGCTGTGGTATCCATGTTGGAGAATGAGAACCTGAGATTAATGGTTCCTGAACGACCTGGGTTCTATGAGGAAAGGTTCATAGAGACTGGTATTGATTCATCATTAAATGATCAACTGAGTTCTTCATCTAATAATGTCACTGTTACATTGCTTGATGGACCCATGGGAGAACTGATTTGCAGGTGCAAGCTTTCATCTTTTCTCTTTTTCTCGACGATCATTGCTCTGTTTTCAACAAAATCGTTAGCAATCGATAGCATAAAAGCAGGGGAATCCATTAATGGCAGTACCCAGATGTTAATTTCACCTGAAAGCAAGTTCGTGTTGGGAATCTTCAATCCCCAGGGCTCCAAATATCATTACTTGGGCATATGGTACAACAACATCCCACAAACTGTCGTGTGGGTCGCAAACAGAGACAACCCACTTGTGAATTCCTCTGCTCATTTAGTATTCAAAGGAGAAAACATTGTTCTTCTGAACAAAACAGGTGGGATTTTATGGACTTCCAATTCTCCACGATCATTGAAAGAACGAGAGGTTCAGCTGTTAGATACAGGGAATTTGGTTTTAAGAGAAACAGGGTCTCAAGATTATGCGTGGCAGAGCTTCGATTACCCGTCTGATACTCTATTACCTGGGATGAAACTGGGTTGGGATTCAAAAACCGGCCTGAACCGGAAGTTAACGTCTTGGAAAAACCCAAATGATCCATCGTCTGGGGATTACACATACAGTGTGGAAATGGATGGGCTTCCACAACTTGTAGTTCGTAAAGGGCCCATCATAACGTTTCGGGGCGGCCCATGGTATGGTAAAAGGTTTAGTGGAAGTGGGGATCTCAGAGCAACAGCAATTTATGCGCCGAAGTTTGATTATAATGGTGATGAACACAGAGCGCTGTTTTCGTATGAGGCGAGGAACAATTTCTCTGTAAGATTGGTGCTGGGCACGGCGGGGTTATTTCAGCAGCTGTATTGGGTGGAAGATGGAGAATATTGGTACCCATTGTATACATTGCCTGGAGATGGGTGCGATGTGTATGGAATCTGTGGGGAATTTGGTGTTTGTACGTTTTCACTCACAGCAGAATGTGATTGTATGGATGGGTTTGAACCCAAATGGCCTGATGATTGGGAAATGTTTAGGCGTTCTGGTGGATGTGTTAGAAAGGACAATCGAACCTGTGGAAATGGCGAGGGGTTTAAACGAATTAGTAGTGTGAAATTTCCAGATTCTTCAGGGTATTTTGTGAATGTCAATATGAGCATTCAAGACTGTGAGGCGGCGTGTTTGAACAACTGTTCTTGCTTGGCTTATGGAATAATGGAGCTTCCAAATGGCGGCTATGGCTGTGTTACCTGGTTCCATAAACTTATGGATGTTAAATATGTTGTTTATAATGGACAGGATCTCTATGCTTCTTGGGCTTTGTCATTTGCTTTATTCTTGGGCGTAGAAGAAAAGATAGAGATCACTGCAGGTGATATTCTAGCTCAAGAAAATGATGTTGAGATGCCAATCTATGATCTTACAACGATCGAGGCTGCCACGGATAATTTCTCTTTCTCGAATAAGATAGGTGAAGGCGGGTTTGGTCCTGTATACGAGAAGAGATTCGACATCATAATCGGGATATCTCGAGGACTTCTTTATCTCCACAGAGACTCGAGGCTAAGAATAATACATAGAGATCTCAAAGTAAGTAATATATTACTCGACAGTGAAATGAATCCGAAAATTTCAGATTTTGGCATGGCACGTATGTTCGGCGAAGATCAAACTACGGCAAAAACCAAAAGAATTGTCGGTACTTATGGCTATATGTCTCCAGAATATGCACTCGACGGGTGTTTTTCATTGAAGTCCGACGTGTTTAGCTTCGGAGTCATTCTTTTGGAGATAGTTAGCGGTAAGAAGAATAGAGGGTTCTTCCATACCGATCATCAACTCAATCTTCTCGGACATGCATGGAAGCTTTGGGATGAAGGAAATGCTTTGGAGTTGATGGATACAGCATTGGAGAACAAATTCCAAGCTTCTGAAGCACTACGATGCATTCAAATAGGGCTTTTGTGTGTTCAGCTGAGCCCTGATGACAGACCAACTATGTGGTCGGTGCTTTCAATGTTGGAGAGTGAAAACATGTTATCTTATCCTAAACAACCTGGATTTTACACAGAGAGAATGTTTTCTAGGACTGATAAATCATTAGCTGAAGCCTCTACTTCCAATGAAGTGACAGTTACTTTGGTACATGGTCGTTAG 4143 41.3 NSIADDTLKQGQSINDTQSIVSAAEIFELGFFSQPQATNLKYLAIWYKGVTPKTVVWVANRDTPVLSSSATLNFRRDGNLVLMNQTGAAFWSSNSTKSIQNPIAQLLDTGNLVLRDSKSEDYVWQSFDYPTDTLLPGMKIGWDSKTGLNRKLKSWTSSNDVSSGEFSFSLNTNGLPQFFVHKGNRTMFRGWPWFDHDFGQSYGNGFNYDLVFDASTEISFSYNDSAHSRTRIVMDSSGSILRHEWNDEGEKWRKAYSFDGAGCNDYDLCGNFGLCNPAVTTSCGCLNGFEQISTKNLSNGCVRRDPKICEAGDGFIKISKVKWPDSTGDSVKMKLGVKDCEAECLKDCGCLAYGTVQIPKIGLACVNWFHKLVDIRYVPDVGSGDDIYVRVAASELESADEKRSVAVVVAVPIVSVIAFLVPPIQEHELEIPIGVLEAATENFSVFNKIGEGGFGSVYKGKLPNGQEIAVKKLAETSGQGLQEFKNEVLFISQLQHRNLVKLLGFCIHNEQILLIYEYLPNKSLDCFIFGWYQAILHLQLLKSDVFSFGVMVLEIVSGKKNKGFFHPEHQLNLLGHAWNLWKEGRSLELIDVILEDQFDEHEALRYINIGLLCVQRRPEDRPIMSAVVSMLENENLRLMVPERPGFYEERFIETGIDSSLNDQLSSSSNNVTVTLLDGPMGELICRCKLSSFLFFSTIIALFSTKSLAIDSIKAGESINGSTQMLISPESKFVLGIFNPQGSKYHYLGIWYNNIPQTVVWVANRDNPLVNSSAHLVFKGENIVLLNKTGGILWTSNSPRSLKEREVQLLDTGNLVLRETGSQDYAWQSFDYPSDTLLPGMKLGWDSKTGLNRKLTSWKNPNDPSSGDYTYSVEMDGLPQLVVRKGPIITFRGGPWYGKRFSGSGDLRATAIYAPKFDYNGDEHRALFSYEARNNFSVRLVLGTAGLFQQLYWVEDGEYWYPLYTLPGDGCDVYGICGEFGVCTFSLTAECDCMDGFEPKWPDDWEMFRRSGGCVRKDNRTCGNGEGFKRISSVKFPDSSGYFVNVNMSIQDCEAACLNNCSCLAYGIMELPNGGYGCVTWFHKLMDVKYVVYNGQDLYASWALSFALFLGVEEKIEITAGDILAQENDVEMPIYDLTTIEAATDNFSFSNKIGEGGFGPVYEKRFDIIIGISRGLLYLHRDSRLRIIHRDLKVSNILLDSEMNPKISDFGMARMFGEDQTTAKTKRIVGTYGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTDHQLNLLGHAWKLWDEGNALELMDTALENKFQASEALRCIQIGLLCVQLSPDDRPTMWSVLSMLESENMLSYPKQPGFYTERMFSRTDKSLAEASTSNEVTVTLVHGR 1380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8023160 8033356 + Cp4.1LG09g08700.1 Cpe09g00876 475242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00876 1380 ProSiteProfiles Bulb-type lectin domain profile. 709 829 IPR001480 -
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1162 1378 - -
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 541 676 - -
Cpe09g00876 1380 SUPERFAMILY Protein kinase-like (PK-like) 1129 1369 IPR011009 -
Cpe09g00876 1380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1186 1198 IPR008271 GO:0004672|GO:0006468
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 3 416 - -
Cpe09g00876 1380 ProSiteProfiles PAN/Apple domain profile. 1021 1102 IPR003609 -
Cpe09g00876 1380 ProSiteProfiles Protein kinase domain profile. 443 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00876 1380 Gene3D Phosphorylase Kinase; domain 1 416 517 - -
Cpe09g00876 1380 Gene3D Phosphorylase Kinase; domain 1 1113 1164 - -
Cpe09g00876 1380 Gene3D Transferase(Phosphotransferase) domain 1 1165 1347 - -
Cpe09g00876 1380 ProSitePatterns Protein kinases ATP-binding region signature. 449 472 IPR017441 GO:0005524
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 541 676 - -
Cpe09g00876 1380 SUPERFAMILY alpha-D-mannose-specific plant lectins 758 863 IPR036426 -
Cpe09g00876 1380 CDD PAN_AP_plant 306 392 - -
Cpe09g00876 1380 ProSiteProfiles PAN/Apple domain profile. 309 392 IPR003609 -
Cpe09g00876 1380 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 160 IPR036426 -
Cpe09g00876 1380 CDD B_lectin 12 130 IPR001480 -
Cpe09g00876 1380 ProSiteProfiles Bulb-type lectin domain profile. 5 127 IPR001480 -
Cpe09g00876 1380 Pfam S-locus glycoprotein domain 187 291 IPR000858 GO:0048544
Cpe09g00876 1380 Pfam S-locus glycoprotein domain 890 999 IPR000858 GO:0048544
Cpe09g00876 1380 Gene3D Transferase(Phosphotransferase) domain 1 518 642 - -
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 701 1100 - -
Cpe09g00876 1380 SMART serkin_6 1146 1336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00876 1380 Pfam D-mannose binding lectin 54 155 IPR001480 -
Cpe09g00876 1380 Pfam D-mannose binding lectin 757 858 IPR001480 -
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 432 530 - -
Cpe09g00876 1380 CDD PAN_AP_plant 1018 1098 - -
Cpe09g00876 1380 Gene3D - 705 829 IPR036426 -
Cpe09g00876 1380 Gene3D - 2 127 IPR036426 -
Cpe09g00876 1380 SUPERFAMILY Protein kinase-like (PK-like) 430 651 IPR011009 -
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 432 530 - -
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1117 1162 - -
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1162 1378 - -
Cpe09g00876 1380 Pfam PAN-like domain 1021 1087 IPR003609 -
Cpe09g00876 1380 Pfam PAN-like domain 309 375 IPR003609 -
Cpe09g00876 1380 Pfam Protein kinase domain 1167 1333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 701 1100 - -
Cpe09g00876 1380 ProSiteProfiles Protein kinase domain profile. 1064 1342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00876 1380 CDD B_lectin 718 832 IPR001480 -
Cpe09g00876 1380 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 416 - -
Cpe09g00876 1380 SMART blect_4 716 832 IPR001480 -
Cpe09g00876 1380 SMART blect_4 11 130 IPR001480 -
Cpe09g00876 1380 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1117 1162 - -
Cpe09g00876 1380 Pfam Protein tyrosine and serine/threonine kinase 446 528 IPR001245 GO:0004672|GO:0006468
Cpe09g00876 1380 SMART ntp_6 1022 1101 IPR003609 -
Cpe09g00876 1380 SMART ntp_6 310 391 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00876 Cpe-Chr9:8023160 Cpe20g00398 Cpe-Chr20:2246374 2.83E-20 dispersed
Cpe16g00466 Cpe-Chr16:5822759 Cpe09g00876 Cpe-Chr9:8023160 1.64E-26 dispersed
Cpe20g00125 Cpe-Chr20:694365 Cpe09g00876 Cpe-Chr9:8023160 3.90E-24 dispersed
Cpe09g00875 Cpe-Chr9:8015940 Cpe09g00876 Cpe-Chr9:8023160 3.57E-13 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62617 PF00069 Pkinase 2.90E-24 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00876 - - cmos:111456701 1044.65