Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00889 ATGTTCAGTTATCTTACTTTCCTCTTCCACATCCTCCTCTGTTTCTTCATCCATGGAAACGCTCAGACCTCAGTTTCATACCCATATCGCAGTTGTTTACCCCACAATTTCACCAAGAACACCGCCTATCAGTTCAGCCTTGATCTTCTCTCCAATGATTTCACCACCATCGCCGCCGTCAAAACATTCTACAGTACTTCCTTCGGCCAACCACCAGACTCCGTTTATGGTCTCTTCCAGTGCCGTGGAGACGTCCATAGCAACATCTGTGAGAATTGCGTGGCCGACGCTGCCAGAAACATTCCCCTGTTCTGTCCCCTGAGTAAAGGCGCTGTTTTTTGGTACGATGAATGCATATTCCGTTACTCCGACAATCCTTTCTTTTCCCAGTTGTCTATAAATGTGAGTTTCGCATTACTGAATACAGCTGATATAGACGTCGACAAGGTTCGATTCAACAAACTAGTGATGTCCTTATTGACCGACACCGGAACTCGAGCAGCCGACAATGCTTTGGTGAACGGATCCTTCGCGACCCAGGTGGTTAATTTCACATCAGATGTAACCCTTTATGCATTAGCACAGTGCACCGGCGATCTGTCCACTCAGAGTTGCCGAGAATGCTTAGCACATGCTATTGAGACTATTCCGAGTTGTTGCACTAATAAACGTGGTGGTAGAGCTCTGTTTCCGAGCTGTTATGTTCGTTACGAGGTTTATCAATTTTTCAATCTCGAGGTACAGCCTCCGGCAACTCCAACACCGCCGCTTCTTCCTCCTCCTCCTCCTCCTTCTCCGCCGCCGCCGCCCGAGAAAAGAAGATTCCCAACGGTCACGATTGTTGGCATTGTGGTTTCAATTACTGTCTCCATAATGCTTTTGGGGGGCTGGTGTTTCCTGCGCCGAAGGCCAAAGACGAAGAAACACTCAGACTTCGATAGACAAATCGAATTGAATTGGTTGAGCCGCTATAAGATCATTAATAACATTGTTCGTGGAATTCTGTATCTACACGAAGATTCTCGACTTAGAATCATTCATCGTGATCTTAAAGCTAGTAATGTATTACTAGACGAGGATATGAATCCAAAAATTTCCGACTTTGGTTTGGCAAGGATTATTCAAGTAAACCAAAATCAAGAAACTTATACCAACCGTGTCGTTGGTACCTTTGGTTATATGTCTCCTGAATATGCAATGCATGGGATCTTCTCCACAAAATCTGACGTGTATAGCTTCAGAGTACTAACCTTAGAGATTATAAGTGGGAACAAAAACAACCGATTTTATCTATCGGAGTTGGCGGAAAACATGTTAACCTATGCTTGGAAAGTATGGAAAGATGGAACACCATTAGAATTATTGGACCCGAGTCTACAAAACAACTACTCAAGAGACGAGGTACTTAGATGCATCCATATTGCTTTATTATGTGTTCAAGATGATCCTAGTCGGAGACCTTCCATGGCATCTATTGTTCTTATGCTCAATAGTTATTCGGTTCCTTTGCCTTTGCCTAAAGAGCCAACAAATTTCATGCACAATATCGACAATGGCAATGTAATAGATAGCGATCGGTCTATGATAAGTAAATTTTTATTGTTGTCTATTAATGAAATGTCTGTAACTGAGTTTCATCCACGATGA 1647 43.17 MFSYLTFLFHILLCFFIHGNAQTSVSYPYRSCLPHNFTKNTAYQFSLDLLSNDFTTIAAVKTFYSTSFGQPPDSVYGLFQCRGDVHSNICENCVADAARNIPLFCPLSKGAVFWYDECIFRYSDNPFFSQLSINVSFALLNTADIDVDKVRFNKLVMSLLTDTGTRAADNALVNGSFATQVVNFTSDVTLYALAQCTGDLSTQSCRECLAHAIETIPSCCTNKRGGRALFPSCYVRYEVYQFFNLEVQPPATPTPPLLPPPPPPSPPPPPEKRRFPTVTIVGIVVSITVSIMLLGGWCFLRRRPKTKKHSDFDRQIELNWLSRYKIINNIVRGILYLHEDSRLRIIHRDLKASNVLLDEDMNPKISDFGLARIIQVNQNQETYTNRVVGTFGYMSPEYAMHGIFSTKSDVYSFRVLTLEIISGNKNNRFYLSELAENMLTYAWKVWKDGTPLELLDPSLQNNYSRDEVLRCIHIALLCVQDDPSRRPSMASIVLMLNSYSVPLPLPKEPTNFMHNIDNGNVIDSDRSMISKFLLLSINEMSVTEFHPR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8091664 8095634 - Cp4.1LG09g08910.1 Cpe09g00889 475255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00889 548 ProSiteProfiles Protein kinase domain profile. 166 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00889 548 Pfam Salt stress response/antifungal 150 239 IPR002902 -
Cpe09g00889 548 Pfam Salt stress response/antifungal 35 124 IPR002902 -
Cpe09g00889 548 SUPERFAMILY Protein kinase-like (PK-like) 314 525 IPR011009 -
Cpe09g00889 548 SMART serkin_6 234 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00889 548 ProSiteProfiles Gnk2-homologous domain profile. 133 242 IPR002902 -
Cpe09g00889 548 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 311 - -
Cpe09g00889 548 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 312 520 - -
Cpe09g00889 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Cpe09g00889 548 Pfam Protein tyrosine and serine/threonine kinase 315 494 IPR001245 GO:0004672|GO:0006468
Cpe09g00889 548 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Cpe09g00889 548 Gene3D Transferase(Phosphotransferase) domain 1 305 502 - -
Cpe09g00889 548 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 6 311 - -
Cpe09g00889 548 MobiDBLite consensus disorder prediction 252 273 - -
Cpe09g00889 548 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 312 520 - -
Cpe09g00889 548 Gene3D - 134 242 IPR038408 -
Cpe09g00889 548 Gene3D - 24 127 IPR038408 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00889 Cpe10g00802 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00514 Cpe-Chr9:3425601 Cpe09g00889 Cpe-Chr9:8091664 1.25E-07 dispersed
Cpe09g00889 Cpe-Chr9:8091664 Cpe10g00802 Cpe-Chr10:4550348 2.71E-110 dispersed
Cpe10g00801 Cpe-Chr10:4546673 Cpe09g00889 Cpe-Chr9:8091664 4.79E-66 dispersed
Cpe10g00799 Cpe-Chr10:4537376 Cpe09g00889 Cpe-Chr9:8091664 5.64E-06 wgd
Cpe19g00977 Cpe-Chr19:6877462 Cpe09g00889 Cpe-Chr9:8091664 3.15E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62618 PF07714 PK_Tyr_Ser-Thr 1.10E-25 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00889 - - cmos:111456844 546.969