Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00926 ATGAACAGCACAAAAGAAGTGGAAATTGTGGCTTCAATTCCAGGGAAGGAGAGTGAAAAAGACCCAGAAGCTGGTTCCAATTCGATTGATTCTCGAGCCAAATTTAGCCTACAAGAACAAGAACAAGAACAAGAACGTAAACTTGAACATGGTTCTTCGTTGAGTGAGAAAGTCGAGGTGGTTGTCGAACGCAACCTCATTCTTGCAGCGTCTATCGGTGACGACTTTCAATTGGAAGTCACTGCCGATCAGATCAATAGCCACTGCGCCACGGCCGACACCCAAACCGTGGACATTGAAGAACCCCTTGATGAAGAAACTAAACAGTTGAGGACAACTGCCAAAAAAATCAGCCTATATCACGCTGCACTCAAGGGAGATTGGGAGAAGGCTCAATCCATTCTAGGCGCGGACCCTTCATGGGCTGTAAGCAACTACATAACGCGAGACAACGAGACAGCTCTTCACATTGCTGCTGGGGCCAAGCACGTCGATTTCGTAGAGCAATTGATCAACATAATGACCCCAGACGACATGACTATGGTAAACACTCATGGAAACACTGCCCTTTGCTTTGCTGCAACCTCAGGTGTTGTAAGAATCGCTGAACTTATGGTGCAAAAGAACAAAGATCTTCCCCTTATTCGTGGATTTGGCAATGCCACTCCCCTGTTCATGGCTATATCGTATCAACGCAAGCAAATGGCTTCTTATCTGTTCTCTGTTACTGATCGAAAGCAGCTGAGCTCTCAAGACCAGATTGAGCTTCTTATTGCTACCATTCATAGTGATTTTTATGGGACAAGAGGAATCTACGAGAAAGAAGTGATGAAGACACTAGCTCATCAACTAGTTAGATCACTATGGGGACATGTCCTGCGAGAATTACCCGAAAAAAAGATGTTAAAGTTCATCAAACATCCCACAATACTCTTACACGATGCAGCAAGAGCAGGCAACGTCGAGTTTCTAATCCTCCTCATTCGATCATACCCAAACATCGCATGGGAAGATGATGAAAATGGCCAGAATGTCTTTCACGTAGCCGTGGAAAATCGCCTCGAGAATGTGTTCAGCCTAATCCACGAGATAAGTGGCCTCAAAGACTTCTCAGCAAAGTACAGAACAACAGGTCAAGAAAAGTACAACATGCTTCATTTAGCTGCAAAACTCGCCGCTCCAAACCATCTCAACAGAGTCTCAGGAGCAGCCCTTCAAATGCAACGTGAGTTACTTTGGTTCAAAGAAGTAGAAAAGATCGTGTTACCATCCCAACGTGAAGCCAAATGTGAGTTTGAGTCTCTTAAGTTAATACCAAGTGAGTTATTCACTAAAGAACATAAAGATCTTCGTAAAGAAGGTGAAGAATGGATGAAGAACACAGCAAATTCTTGTATGCTTGTCTCAACTTTGATAGCTACTGTTGTTTTTGCTGCTGCTTTCACAGTTCCTGGTGGCAATGATGATAAAGGCACCCCTGTTTTTCAACGTGAGTTTTGGTTCACTATATTTGTGATATCAGATGCATTTGCGTTGGTATCATCTTCAACTTCTATTCTTATGTTCTTATCGATTTTGACATCACGTTATGCGGAAGATGATTTCTTGCACTCATTGCCGTCTAAGCTGCTGTTTGGAATAGCGTCGCTGTTCATATCAATTGTGTGCATGGTTATAGCGTTTAGTGCGACATTCTTTATGCTCTATGATGGGACCAATGTGTGGATACCAACCACTGTGACAGCAATAGCTATTGTGCCAATTAGCTGCTTCTTTGCGCTTCAATTTGGACTGTGGATGGATACGTTTTACAACACTTACTTGTCTAGACTTCTGTTCAAACCCCATCAACGTAAGTTGTTCTCATCCTCTGCTTCTCTTGCTGTTGAGTTGTTTCGTGAGCTTAAGAAAAGGAGAAGTGAGAGGAAATACTATCGGTGGGAACATTAG 1950 43.13 MNSTKEVEIVASIPGKESEKDPEAGSNSIDSRAKFSLQEQEQEQERKLEHGSSLSEKVEVVVERNLILAASIGDDFQLEVTADQINSHCATADTQTVDIEEPLDEETKQLRTTAKKISLYHAALKGDWEKAQSILGADPSWAVSNYITRDNETALHIAAGAKHVDFVEQLINIMTPDDMTMVNTHGNTALCFAATSGVVRIAELMVQKNKDLPLIRGFGNATPLFMAISYQRKQMASYLFSVTDRKQLSSQDQIELLIATIHSDFYGTRGIYEKEVMKTLAHQLVRSLWGHVLRELPEKKMLKFIKHPTILLHDAARAGNVEFLILLIRSYPNIAWEDDENGQNVFHVAVENRLENVFSLIHEISGLKDFSAKYRTTGQEKYNMLHLAAKLAAPNHLNRVSGAALQMQRELLWFKEVEKIVLPSQREAKCEFESLKLIPSELFTKEHKDLRKEGEEWMKNTANSCMLVSTLIATVVFAAAFTVPGGNDDKGTPVFQREFWFTIFVISDAFALVSSSTSILMFLSILTSRYAEDDFLHSLPSKLLFGIASLFISIVCMVIAFSATFFMLYDGTNVWIPTTVTAIAIVPISCFFALQFGLWMDTFYNTYLSRLLFKPHQRKLFSSSASLAVELFRELKKRRSERKYYRWEH 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8331449 8335733 + Cp4.1LG09g09130.1 Cpe09g00926 475292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00926 649 MobiDBLite consensus disorder prediction 12 27 - -
Cpe09g00926 649 MobiDBLite consensus disorder prediction 36 52 - -
Cpe09g00926 649 Pfam Domain of unknown function 455 567 IPR026961 -
Cpe09g00926 649 PANTHER ANKYRIN REPEAT PROTEIN 277 621 - -
Cpe09g00926 649 MobiDBLite consensus disorder prediction 1 52 - -
Cpe09g00926 649 PANTHER ANKYRIN REPEAT PROTEIN 147 267 - -
Cpe09g00926 649 Gene3D - 32 286 IPR036770 -
Cpe09g00926 649 SUPERFAMILY Ankyrin repeat 119 390 IPR036770 -
Cpe09g00926 649 Pfam Ankyrin repeats (3 copies) 119 211 IPR002110 GO:0005515
Cpe09g00926 649 Gene3D - 291 402 IPR036770 -
Cpe09g00926 649 SMART ANK_2a 341 372 IPR002110 GO:0005515
Cpe09g00926 649 SMART ANK_2a 307 336 IPR002110 GO:0005515
Cpe09g00926 649 SMART ANK_2a 219 248 IPR002110 GO:0005515
Cpe09g00926 649 SMART ANK_2a 185 214 IPR002110 GO:0005515
Cpe09g00926 649 SMART ANK_2a 150 181 IPR002110 GO:0005515
Cpe09g00926 649 PANTHER CASKIN 277 621 - -
Cpe09g00926 649 PANTHER CASKIN 147 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00029 Cpe-Chr5:130260 Cpe09g00926 Cpe-Chr9:8331449 7.16E-33 dispersed
Cpe09g00926 Cpe-Chr9:8331449 Cpe20g00353 Cpe-Chr20:1981178 4.86E-84 dispersed
Cpe09g00921 Cpe-Chr9:8305340 Cpe09g00926 Cpe-Chr9:8331449 4.63E-172 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00926 - - csv:101209008 975.311