Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00927 ATGAGTTCGAGAGGGGAAAGCGATGGGGAGTCTGAAATGAAGGGAAGCATGTGGGTTTTGGACCAGAAACTCGATCAACCAATGGATGAAGAAGCTGGGAGGCTTAACAATATGTACAAAGAAAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTCTACGTTTTTTACAATACATTTCCTCATGGAATTTCTGATCCGGAAGATGTAGTTGGAGCTCTTTCATTGATTATATACTCTCTCACTCTCATTCCTCTCATAAAATATGTATTTATCGTGTGTAAAGCCAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAATGTAAAAACTATTCCGAACCAACATCGAAAGGATGAGGAGCTAACGACATATAGCCGCTCTAAGTTTCACGAGCAATCGTTTGCTGCTAAAACTAAAGGATGGCTTGAAAGACAATCATCCAGGAAGAATGCGTTGCTCATTCTTGTTCTTGTTGGCACTTCTATGGTTGTTGGAGATGGAATTCTCACGCCTGCAATTTCGGGCATGTTCAACATCTGGAAATATGATAGAACAATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAAAAGGCGAGGGATGGACGGTTGGACGTCCCTCGGAGGTGTTCTTCTGAGTATAACAGGCACAGAGGCTTTATTTGCGGATCTAGCTCATTTTCGTGTAGCTGCTATACAGATTGCTTTTACAGTATTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAAGCTGCCTATCTTATGAGCAATATGGAGCATGTCAATGATGTCTTCTATCGTTCAATCCCAGGGACAGCAGTGGTGGTAGTCATGCTTGTGACCACACTGCTTATGATTCTAATCATGATCTTGGTATGGCGCTGTCATTGGGTCATCGCCCTGATCTTCACCGGTCTGTCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTACCCCTTGTGATTGCTGCAGCCTTTCTTATCATCATGTATGTGTGGCATTATGGTACTGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGTCTTGGTCCGAGTTTAGGATTAGTCCGTGTTCCTGGAATTGGACTTGTATATACCGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACGAATCTGCCCGCCATCCATTCTGTCGTCGTGTTTGTTTGCGTGAAATACCTTCCAGTCTACACCGTGCCAGAAGAAGAACGATTCCTGGTAAAGCGGATAGGACCAAAGAACTTCCACATGTTTCGTTGTGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGATGACTTTGAGAAGAAGCTTTTTGATAGCATCTTCCTGTTTGTTAGACTTGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAGTACAGTTTATATGGTCAGCAAACTGAGCATTCAAGGGATGGCCTGTTGATTGGCACCAATGGAAATGCAACTACATCCAATGGGGACATGACATTCTCATCGGTTGACTCGATCGTGCCTGTTCGATCTCCGGTGCGTTCGAATAACACGGTGAGATCATCTGGGCAGGCAAGCAACCATACGGATAGCGACGAGATTGAGTTCTTGATTAGGTGTAGAGATGCAGGGGTGGTGCATATATTGGGGAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTCTACAAGAAGATAGCTGTGGATTATATATATGCATTTCTTAGAAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTTTATTAAACGTTGGCCAAATTTTCTATGTATAG 1944 43.0 MSSRGESDGESEMKGSMWVLDQKLDQPMDEEAGRLNNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHANVKTIPNQHRKDEELTTYSRSKFHEQSFAAKTKGWLERQSSRKNALLILVLVGTSMVVGDGILTPAISGMFNIWKYDRTILRAFSPVYIYRYFKRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVFVFPCLLLAYSGQAAYLMSNMEHVNDVFYRSIPGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLIVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGTNGNATTSNGDMTFSSVDSIVPVRSPVRSNNTVRSSGQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8337206 8343953 - Cp4.1LG09g09240.1 Cpe09g00927 475293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00927 647 Pfam K+ potassium transporter 54 199 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe09g00927 647 Pfam K+ potassium transporter 300 479 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe09g00927 647 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 200 300 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe09g00927 647 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 199 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe09g00927 647 PANTHER POTASSIUM TRANSPORTER 3 199 - -
Cpe09g00927 647 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 300 646 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe09g00927 647 PANTHER POTASSIUM TRANSPORTER 300 646 - -
Cpe09g00927 647 PANTHER POTASSIUM TRANSPORTER 200 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00927 Cpe-Chr9:8337206 Cpe13g00909 Cpe-Chr13:7755145 2.26E-155 dispersed
Cpe20g00269 Cpe-Chr20:1502460 Cpe09g00927 Cpe-Chr9:8337206 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00927 K03549 - csv:101217915 629.787