Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00929 ATGAGCCTAAGCGTTGGTCATACTTTAGAAACTTGGCTCAGGAGGAGTTTGTTGGAAGGGATGCTTCTCTTATGGATGATGACCACCTGGGCCAGAAACTTTGAAAGCATTTCTGGCATCAATCCATTGCATGCTAATGGGGCTGGCTTGAGCTTGAACGTGGAGAATCATGAGCCTAAGCGTTGGTCATACTTTAGAAACTTGGCTCAGGAGGAGTTTGTTGGAAGGGATGCTTCTCTTATGGATGATGACCACCTGGGCTTCTCTTCCTCACTTGCAAATTCAGATGTAGGTGCGATTTATCACAGAGATTCTCAAATCAATTTTGGTGACAACATTCAGCCGGAATCCTGTCTGCTCACTGGACCCAGCTCTACAAATCCATATACAGATTATGTTTCTTCAAAGCCTAAGGGCGATGACAGCATACAGTTGGATGATCCTAGCGCTAAAGCCCAACACACTAAAGGCCAACATGCTGAGAATGTGGATGCAAAATTGGATATCCAAGATATTGGTGTACCTCTGGCTGATATTTATCTTGAAGAATTTGATATCAGTACGTTGCAGATAATTAACAATGAAGACCTTGAAGAGCAACGAGAACTGGGTTCTGGCACATTTGGTACAGTGTATCATGGGAAGTGGCGAGGATCAGATGTAGCAATTAAACGGATAAAAAAAAGTTGTTTCACCTGTAGGTCATCAGAGCAAGAAAGATTGACTGTAGAGTTTTGGCGTGAAGCTGAGATTCTTTCAAAGCTTCATCATCCAAATGTGGTGGCCTTTTATGGTGTGGTGCAGGATGGGCCAGGTGGGACTTTGGCCACAGTGACTGAATTCATGGTCAATGGCTCCTTACGGAATGTTTTACTTAGCAAAGACCGGTACCTGGATCGACGCAAGAGGCTTATTATTGCAATGGATGCAGCATTTGGAATGGAATATCTGCATTCAAAGAATATTGTGCACTTTGATTTAAAATGCGACAACTTGCTTGTCAACTTGAAAGACCCTTTACGGCCAATTTGCAAGGTTGGAGATTTTGGCTTGTCAAAAATAAAAAGAAACACATTAGTTACTGGCGGTGTCCGAGGGACCCTTCCATGGATGGCTCCTGAACTACTTAACGGTAGCAGCAGCAAGGTTTCTGAAAAGGTTGACGTATTCTCATTTGGCATTGTACTATGGGAGATCCTCACTGGCGAGGAGCCATATGCAAATATGCACTATGGAGCAATCATAGGAGGCATAGTGAACAACACATTGAGACCACCGGTACCAAACTTCTGTGACCCCGACTGGATATTGCTGATGGAACAGTGTTGGTCGCCTGACCCGGTAGCCCGGCCATCTTTCACAGACATAGCGAGGCGATTGCGTGTGATGTCTACGACTACCCAGACAAAAGCACCACATGGTCATCAACCACAGAATCAGGCACCCAAGTAA 1452 44.7 MSLSVGHTLETWLRRSLLEGMLLLWMMTTWARNFESISGINPLHANGAGLSLNVENHEPKRWSYFRNLAQEEFVGRDASLMDDDHLGFSSSLANSDVGAIYHRDSQINFGDNIQPESCLLTGPSSTNPYTDYVSSKPKGDDSIQLDDPSAKAQHTKGQHAENVDAKLDIQDIGVPLADIYLEEFDISTLQIINNEDLEEQRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFTCRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRNVLLSKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPPVPNFCDPDWILLMEQCWSPDPVARPSFTDIARRLRVMSTTTQTKAPHGHQPQNQAPK 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8355473 8363284 - Cp4.1LG09g09390.1 Cpe09g00929 475295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00929 483 SUPERFAMILY Protein kinase-like (PK-like) 188 459 IPR011009 -
Cpe09g00929 483 MobiDBLite consensus disorder prediction 119 133 - -
Cpe09g00929 483 Gene3D Phosphorylase Kinase; domain 1 190 284 - -
Cpe09g00929 483 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 30 471 - -
Cpe09g00929 483 Gene3D Transferase(Phosphotransferase) domain 1 285 482 - -
Cpe09g00929 483 ProSitePatterns Protein kinases ATP-binding region signature. 203 228 IPR017441 GO:0005524
Cpe09g00929 483 PANTHER SERINE-THREONINE PROTEIN KINASE 30 471 - -
Cpe09g00929 483 SMART serkin_6 197 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00929 483 MobiDBLite consensus disorder prediction 119 159 - -
Cpe09g00929 483 CDD STKc_MAP3K-like 203 460 - -
Cpe09g00929 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Cpe09g00929 483 Pfam Protein tyrosine and serine/threonine kinase 198 460 IPR001245 GO:0004672|GO:0006468
Cpe09g00929 483 PRINTS Tyrosine kinase catalytic domain signature 387 409 IPR001245 GO:0004672|GO:0006468
Cpe09g00929 483 PRINTS Tyrosine kinase catalytic domain signature 316 334 IPR001245 GO:0004672|GO:0006468
Cpe09g00929 483 PRINTS Tyrosine kinase catalytic domain signature 431 453 IPR001245 GO:0004672|GO:0006468
Cpe09g00929 483 PRINTS Tyrosine kinase catalytic domain signature 279 292 IPR001245 GO:0004672|GO:0006468
Cpe09g00929 483 MobiDBLite consensus disorder prediction 140 159 - -
Cpe09g00929 483 ProSiteProfiles Protein kinase domain profile. 197 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01037 Cpe-Chr5:6804613 Cpe09g00929 Cpe-Chr9:8355473 0 dispersed
Cpe09g00929 Cpe-Chr9:8355473 Cpe16g00711 Cpe-Chr16:7264664 0 dispersed
Cpe20g00270 Cpe-Chr20:1514288 Cpe09g00929 Cpe-Chr9:8355473 5.31E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62619 PF07714 PK_Tyr_Ser-Thr 3.50E-62 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00929 - - cpep:111802158 978.778