Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00930 ATGTTCAGCCCTGGTACTGCTCGTTCTCCTGCTACGCCTATCACTGCTATTTCATTTGGAGAACCTCGTGCTCGGTCCTTCCTTAAGGAAGCCACTCCATCGCCTCTTCTTTCTTTATTCACCCGTGCCTCCCTCCACGCCCACTCTGTGCCACGACCGTGCTCTACTCTCAAAGCCATGGCTGATGGTGAAGCCGTCACTCTTTCTCCAAAGATCACCGCTTCATCTCCTTCTGTATCGGCTATAATGTTCAGTTTCAGGAAAGAAGCTAGCTCTGATATCCTTGTCAGACAAGAAAAATCTTGCATTTCTAGGAAATGGGCTTCAAGAATTAGGCTTGATGGTCGTGTAAAAACTTTGCATCCTTCTATACATGGGGGTATTCTTGCTAGAAGGGACCAAAAGCATCATATGGACGCCCTTGATAAACATGGAATTGGCACATTTGATGTTGTCGTGGTAAACTTGTACCCCTTCTATGATAAAGTCACCTCATCTCAAAAAATAGACTTTGAAGATGGAATCGAGAACATTGATATTGGTGGCCCGGCCATGATCAGAGCTGCTGCAAAGAACCACAAGGATGTCTTAGTGGTCGTTGATACCGAAGACTATCCTGCACTGCTTGATTTCTTGAAAGGAAATGAGGATGATCAACAATTTCGTAGAAAGCTTGCTTGGAAGGCATTTCAACATGTAGCTTCTTACGATTCTGCAGTCTCAGAATGGCTGTGGAAGCAGACTGTTGGAGATAAATTTCCTCCCAGCTTAACCGTGCCACTTTCCCTCAAAAGTTCTCTTCGCTACGGTGAAAATCCTCATCAGAAGGCGGCCTTTTATGTTGATAAGAGTATCTCTGAAGTCAATACAGGTGGTATTGCAACAGCCATCCAACACCATGGAAAGGAGATGTCTTATAATAACTACTTAGATGCGGATGCAGCTTGGAATTGTGTGTCAGAGTTTAGGAATCCTACTTGTGTAGTTGTGAAACACACAAATCCATGTGGTGTAGCTTCACGTGATGATATTCTGGAAGCATATAGACTAGCTGTGAAGGCTGACCCCGTGAGTGCATTTGGTGGCATTGTAGCCTTCAACGTAGAAGTTGATGAGGTTCTTGCAAGGGAAATTCGGGAGTTCAGAAGCCCTACAGATGGGGAAACACGGATGTTTTATGAGATTGTTGTTGCACCCAAGTACACAGAGAAGGGGCTTGAGATCTTGCGTGGGAAATCAAAGACTCTGCGAATTCTTGAGGCAAACAAAAATGAGAAAGGAAAACTCTCACTCAGGCAAGTTGGTGGGGGGTGGTTAGCACAAGATTCTGACGACTTGGTTCCCCAAGATATACAATTTAACGTAGTTTCTGGAAAGGCCCCTCAAGAGAGCGAGCTTCAAGATGCAGAGTTTGCATGGTTGTGCGTCAAGCATGTTAAGAGCAATGCCATTGTGATAGCAAAGAATAACTGTATGTTGGGTATGGGAAGCGGGCAACCAAATCGTCTCGAAAGTTTGAGGATAGCCTTGAGGAAAGCTGGGGACGAGGTCAAAGGAGCTGCTTTGGCTAGTGACGCATTCTTCCCATTTGCTTGGAATGATGCAGTGGAAGAAGCATGCCAGAGTGGAGTAGGTGTTATTGCAGAGCCCGGGGGCAGCATTCGAGATCCTGATGCTATCGACTGCTGCAACAAGTATGGCGTGTCCCTCGTCTTCACCAACGTGAGGCATTTCAGGCATTGA 1743 45.84 MFSPGTARSPATPITAISFGEPRARSFLKEATPSPLLSLFTRASLHAHSVPRPCSTLKAMADGEAVTLSPKITASSPSVSAIMFSFRKEASSDILVRQEKSCISRKWASRIRLDGRVKTLHPSIHGGILARRDQKHHMDALDKHGIGTFDVVVVNLYPFYDKVTSSQKIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDTEDYPALLDFLKGNEDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQTVGDKFPPSLTVPLSLKSSLRYGENPHQKAAFYVDKSISEVNTGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFRNPTCVVVKHTNPCGVASRDDILEAYRLAVKADPVSAFGGIVAFNVEVDEVLAREIREFRSPTDGETRMFYEIVVAPKYTEKGLEILRGKSKTLRILEANKNEKGKLSLRQVGGGWLAQDSDDLVPQDIQFNVVSGKAPQESELQDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRLESLRIALRKAGDEVKGAALASDAFFPFAWNDAVEEACQSGVGVIAEPGGSIRDPDAIDCCNKYGVSLVFTNVRHFRH 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8365684 8374022 + Cp4.1LG09g09320.1 Cpe09g00930 475296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00930 580 Pfam AICARFT/IMPCHase bienzyme 189 512 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 Gene3D - 261 428 IPR024051 -
Cpe09g00930 580 SUPERFAMILY Cytidine deaminase-like 264 580 IPR016193 GO:0003824
Cpe09g00930 580 SMART MGS_2a 91 184 IPR011607 -
Cpe09g00930 580 Gene3D - 92 251 IPR036914 -
Cpe09g00930 580 SUPERFAMILY Methylglyoxal synthase-like 112 247 IPR036914 -
Cpe09g00930 580 Pfam MGS-like domain 107 183 IPR011607 -
Cpe09g00930 580 PANTHER AICARFT/IMPCHASE BIENZYME FAMILY PROTEIN 113 580 - -
Cpe09g00930 580 PIRSF PurH 38 81 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 PIRSF PurH 99 580 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 Hamap Bifunctional purine biosynthesis protein PurH [purH]. 53 580 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 CDD IMPCH 113 244 - -
Cpe09g00930 580 PANTHER BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH 113 580 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 SMART aicarft_impchas 189 513 IPR002695 GO:0003937|GO:0004643|GO:0006164
Cpe09g00930 580 Gene3D - 448 580 IPR024051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00272 Cpe-Chr20:1527668 Cpe09g00930 Cpe-Chr9:8365684 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00930 K00602 - csv:101206006 991.875