Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00932 ATGATCATCAACCATTGTGGCGCTGCCATGGCCGCCAAGCCTGCATGGCTTCAGGCCCTCATGGCCGAGACCTTCTTTGGCACTTGTTTGCTTCATGAAAACCGCCGGAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATTCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGACGCCGCCGCTGCCGCCGCCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGA 750 50.4 MIINHCGAAMAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8380164 8382165 + Cp4.1LG09g09300.1 Cpe09g00932 475298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00932 249 Pfam PLATZ transcription factor 68 140 IPR006734 -
Cpe09g00932 249 PANTHER - 14 249 - -
Cpe09g00932 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00068 Cpe-Chr1:412106 Cpe09g00932 Cpe-Chr9:8380164 1.36E-16 dispersed
Cpe09g00932 Cpe-Chr9:8380164 Cpe10g00019 Cpe-Chr10:141080 6.55E-101 dispersed
Cpe20g00274 Cpe-Chr20:1537365 Cpe09g00932 Cpe-Chr9:8380164 3.74E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50030 PF04640 PLATZ 4.00E-28 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00932 - - cmos:111456982 507.294