Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00933 ATGGCCATTGCCTATGCTAACACCGATTCCATGGCCGCTTTTCTCATCAAGGATCATCATCATCATCATCACCACCATTCTTCTCTCTCCTTCTTCTTCAGCTACCTGCTCTTTTTTCTTCTGTTTTCATCTCCTCCCACCGCTTACGCATTTACTGGAGATGTAGCCGAAGATTCAAAGAACAGAAGGGATGATTTGTTTGTGGAAATTCTTAAAGACGAAGCAGTAGGAAGATTGAACGAGCTAGGGAAGGTAAGTGATGCTGATCGCTATCTTGAGAGGACGTTCTTGAGTCCAGCTTCTATCAAAGCAAGATTTCTTCTTAAAAAATGGATGGAGGATTCTGGATTAAGAACGTGGGTGGACTGTATGGGCAATCTACATGGTCGAGCTGAGGGAAGGAATGCAAGTGCTGAAGCTTTACTGATTGGTTCTCACTTGGATACCGTTGTTGATGCTGGAAAATTTGATGGCGCATTAGGCATCATATCTGCTATCTCTGCTTTGAAAGTTTTCTATATGAATGGGAAGTTAGAAGAATTAAAGAGGCCAATTGAGGTGATTGCCTTCAGTGATGAAGAGGGTGTGAGGTTTCAATCAACCTTCTTGGGAAGTGCTGCTATTGCTGGTATTTTACCAGTTTCGTCTTTGGAAATATCAGATAAAAGTGGTATGTCAATAAAAGATGTTATTACGGAGAGTGGAGTAGAGATAACAGAGGAGAACTTGTTGCAACTCAAGTATGACCGCAAGTCTGTATGGGGATATGTTGAGGTTCATATCGAACAAGGACCTGTACTTGAATGGACTGGTTTTCCTCTTGGAGTGGTTAGGGGCATTGCTGGGCAGTCACGACTAAAGGTTACAGTGAGAGGTTCTCAGGGGCATGCAGGAACAGTTCCAATGCCTTTGCGCCAGGATCCCATGGCAGCTTCAGCTGAATTGATTGTACAATTGGAAAAGCTCTGTAAGCAACCAGAGAGCTACTTATCTTTTGATGGTCATTGCAGTGATTTTACCTTGAAGTCACTTTCCACATCTCTTGTCTGTACGGTTGGAGAGATATCAACATGGCCCAGTGCAAGTAATGTCATTCCTGGCCAGGTGACCTTCACTGTGGATTTACGTACTATCGATGACATAGGACGAGAAGCCGTGATTTATGAATTCTCTAATCAGCATGATGCAAATGCTGTAATCAGTGATTCGGAGCTGAGCTCGCAGCTGAAATCTGCAGCTTCTACGGCCTTAAAAAAAATGGTAGGCGACATTCAAGAGGAAGTACCTATATTAATGAGTGGAGCAGGGCATGATGCAATGGCTATGTCTCATTTGACAAAGGTGGGAATGTTGTTTGTCCGATGTCGTGGAGGCGTAAGTCACTCTCCTGCCGAGCATGTATTGGATGACGATGTTTGGGCTGCAGATCGAACTGCACAACAGTTTGACCATGTGGAGTGCGGTCGTGCCATTGTGGACGCAGGGGACTAG 1491 44.4 MAIAYANTDSMAAFLIKDHHHHHHHHSSLSFFFSYLLFFLLFSSPPTAYAFTGDVAEDSKNRRDDLFVEILKDEAVGRLNELGKVSDADRYLERTFLSPASIKARFLLKKWMEDSGLRTWVDCMGNLHGRAEGRNASAEALLIGSHLDTVVDAGKFDGALGIISAISALKVFYMNGKLEELKRPIEVIAFSDEEGVRFQSTFLGSAAIAGILPVSSLEISDKSGMSIKDVITESGVEITEENLLQLKYDRKSVWGYVEVHIEQGPVLEWTGFPLGVVRGIAGQSRLKVTVRGSQGHAGTVPMPLRQDPMAASAELIVQLEKLCKQPESYLSFDGHCSDFTLKSLSTSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDIGREAVIYEFSNQHDANAVISDSELSSQLKSAASTALKKMVGDIQEEVPILMSGAGHDAMAMSHLTKVGMLFVRCRGGVSHSPAEHVLDDDVWAADRTAQQFDHVECGRAIVDAGD 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8390455 8395524 + Cp4.1LG09g09330.1 Cpe09g00933 475299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00933 496 SUPERFAMILY Zn-dependent exopeptidases 73 477 - -
Cpe09g00933 496 CDD M20_bAS 78 475 - -
Cpe09g00933 496 Pfam Peptidase family M20/M25/M40 142 475 IPR002933 GO:0016787
Cpe09g00933 496 Pfam Peptidase dimerisation domain 282 391 IPR011650 -
Cpe09g00933 496 SUPERFAMILY Bacterial exopeptidase dimerisation domain 282 405 IPR036264 -
Cpe09g00933 496 PANTHER ALLANTOATE DEIMINASE-RELATED 62 476 - -
Cpe09g00933 496 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 77 472 IPR010158 GO:0016813
Cpe09g00933 496 Gene3D - 282 408 - -
Cpe09g00933 496 Gene3D Zn peptidases 86 474 - -
Cpe09g00933 496 PANTHER ALLANTOATE DEIMINASE-RELATED 62 476 IPR010158 GO:0016813
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00313 Cpe-Chr8:1989329 Cpe09g00933 Cpe-Chr9:8390455 4.52E-47 transposed
Cpe20g00275 Cpe-Chr20:1544339 Cpe09g00933 Cpe-Chr9:8390455 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00933 K02083 - csv:101218785 834.328