Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00934 ATGACCACCACCTCTTCGAAATCTGGGTTTAGGGTAATGGCTCCGACGGAGTTGAAACCGCTTTTTTTGCAATTTCTTCTGCTTCTGATGTTGATTTGGGTGTCCAGAATAGGCGCCGAGGATACTATGTTCAACGAGTCAGGGCATTCGGTTGTTTCCAGAAATGAAAACCCAAAAGGTCGGTGCCCTCATGGTTGGTTTATTAGCCCAAACAAGACTAAGTGCTACGGTTTCATGTCGGTCCCTAAATCATGGAATGAATCAGAGAGCCAATGTAACGAGTATGGTGGGAACTTAGCAGCACTGATAACATATCAGGAGTTTAGCTTTGCGCAAAATCTGTGTAATGGAACTCTTGGTGGCTGTTGGGTTGGTGGCCGAGCGTTCAACTCCTCGAATGATTTTGTTTGGAAGTGGTCAGATAATGTTTCAAAATGGAACGATTCCATGTTTCCCAGCTCAGCTTTGCAATCTAATTGCAAAAATGTCTCGTGCCGCGCGAATGATTCAGTAGAAACATGTACTTCGATATCTGGTGGATTGGCAACACCGTTACTTAAGGATGAGAAATGCAACAGTTCTCACCCTTACATATGCATGATAGATCTAGATGGTAGATGCCATCACATGCAATGCCACAAGGAGTATCTAGTCATACTAGCTGTTGTGAGTGGGTTGATAGTTTGCACGACGTTAGCTGTGGTGGTTTGGCTTCTTGCCTACAAGAGGAGCAAAAAGCGGAGAAGGTCTCGAAAGCCATCGAATACTGCAGCTTCTGCATTGGTACCACCTTCATGGAAGGTGTTTACCAAAGAAGAGCTAAGATCGATTACTAAAAACTTCAGTGAGGGAAACCGTCTTCTTGGAGACACGAAAACAGGTGGTACATACAGTGGCCTTTTACCTGATGGTTCAAGAGTTGCAATTAAAAGGTTAAAGAAGTCCAGCTTTCAGAGGAAAAAGGAGTTCCATTCTGAAATTGCAAGAGTTGCTAAACTTCGTCATCCGAATTTGGTTGCCCTGAAAGGATGCTGCTATGACCACGGTGACCGCTACATTGTTTATGAATTCATTGTTAATGGTCCCTTAGATAGATGGCTTTACCATGTCCCAAGAGGTGGTCGAAGCTTAGATTGGACCATGCGAATGAAAGTCGCCACGACTCTTGCCCAAGGGATTGCGTTCCTTCACGACAAGGTCAAGCCACACGTGGTACATCGTGATATCCGAGCCAGTAATGTACTTCTCGATGAAGATTTTGGAGCACATCTGATGGGAGTTGGCCTGTCGAAGTTGGTTGCATATGAAGTGATGCATGAGAGGACTGTGATGGCAGGGGGAACCTATGGTTACCTTGCTCCCGAATTTGTCTACAGAAATGAGCTAACGACAAAGAGCGATGTCTATAGTTTTGGGGTGCTGTTGCTTGAAGTTGTGACGGGTCGAAGGCCTGCACAGGCAGTTGATTCTGTTGGTTGGCAGAGCATTTTCGAATGGGCGACGCCCCTCGTGCAGGCTCACCGTTACCTAGATCTCTTGGATCCTCATATCACAGCCACATCTACTTCTGAAATTCCGGAGGCTGGTGTTGTTCAGAAGGTGGTGGACCTTGTGTATGCTTGCACACAGCACGTCCCATCCATGCGCCCTAGAATGTCGCATGTTGTTCATCAGTTGCAACAATTGGCACCCTCACCTCTCACTATGAAGTAA 1713 46.06 MTTTSSKSGFRVMAPTELKPLFLQFLLLLMLIWVSRIGAEDTMFNESGHSVVSRNENPKGRCPHGWFISPNKTKCYGFMSVPKSWNESESQCNEYGGNLAALITYQEFSFAQNLCNGTLGGCWVGGRAFNSSNDFVWKWSDNVSKWNDSMFPSSALQSNCKNVSCRANDSVETCTSISGGLATPLLKDEKCNSSHPYICMIDLDGRCHHMQCHKEYLVILAVVSGLIVCTTLAVVVWLLAYKRSKKRRRSRKPSNTAASALVPPSWKVFTKEELRSITKNFSEGNRLLGDTKTGGTYSGLLPDGSRVAIKRLKKSSFQRKKEFHSEIARVAKLRHPNLVALKGCCYDHGDRYIVYEFIVNGPLDRWLYHVPRGGRSLDWTMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEDFGAHLMGVGLSKLVAYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEVVTGRRPAQAVDSVGWQSIFEWATPLVQAHRYLDLLDPHITATSTSEIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAPSPLTMK 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8393645 8397909 - Cp4.1LG09g09400.1 Cpe09g00934 475300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00934 570 Pfam Protein tyrosine and serine/threonine kinase 288 559 IPR001245 GO:0004672|GO:0006468
Cpe09g00934 570 SMART tyrkin_6 285 559 IPR020635 GO:0004713|GO:0006468
Cpe09g00934 570 SUPERFAMILY Protein kinase-like (PK-like) 255 559 IPR011009 -
Cpe09g00934 570 Gene3D - 42 202 IPR016186 -
Cpe09g00934 570 CDD CLECT 74 199 - -
Cpe09g00934 570 Pfam Lectin C-type domain 82 200 IPR001304 -
Cpe09g00934 570 ProSiteProfiles Protein kinase domain profile. 282 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00934 570 Gene3D Transferase(Phosphotransferase) domain 1 358 566 - -
Cpe09g00934 570 ProSitePatterns Tyrosine protein kinases specific active-site signature. 404 416 IPR008266 GO:0004672|GO:0006468
Cpe09g00934 570 ProSiteProfiles C-type lectin domain profile. 71 200 IPR001304 -
Cpe09g00934 570 Gene3D Phosphorylase Kinase; domain 1 240 357 - -
Cpe09g00934 570 SUPERFAMILY C-type lectin-like 54 202 IPR016187 -
Cpe09g00934 570 SMART CLECT_2 62 200 IPR001304 -
Cpe09g00934 570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 563 - -
Cpe09g00934 570 PANTHER - 17 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00934 Cpe-Chr9:8393645 Cpe15g00892 Cpe-Chr15:8578801 1.92E-56 dispersed
Cpe20g00276 Cpe-Chr20:1549162 Cpe09g00934 Cpe-Chr9:8393645 2.88E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62620 PF07714 PK_Tyr_Ser-Thr 2.40E-39 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00934 - - csv:101218425 1021.15