Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00935 ATGAGTTTCATAAACTCCTCCATCACTCTCCCATTTAGCTATAATGTTTCGGGTTCGAATCGCTTTCCGGGCTCGACTAGTTCGAGCCCGACAGAACCCATGATGGATTCAAGAATTTGGAGCAAACTACCCGAGAGGCTGCTGGATCGCGTCGTGGCGTTCCTCCCTCCACCGGCGTTCTTCCGAGCTCGTTGCGTCTGTAAAAGATGGTACGGCCTTCTCTTCTCCGCCGCCTTTCTTGAATTGTATCTCCTACTTCCGCCGCACCGCCGCCATTGGTTCCTTTTCTTCAAGCTCAAGGCAAATAAGACCCAAATTTACAGAAATTGTGGCGGCCAATCCCGCCCCATCTACGAAGGCTACCTCTTCAATCCATACGACGTGGCGTGGCACCGCCTCTCCTTCGCTTTAATCCCGCCGGGATTCTCACCGGTGGCCGCCTCCGGCGGCCTAATCTGCTGGGCACCGGACGGCGGAGGTCCCAAAACCCTAATCCTCTCAAACCCAATTCTAGGGACACTCTCCCAACTTCCCCCAACGACAAGACCGCGCCTTTTTCCGTCGATCGGCCTCGCCGTAACGCCATTCTCCGTCGACATAACCATTGCCGGCGACGACTTAATTTCCCCCTACGCCGTGAAAAACCTCACCGCGGAGACGTTCCACATAGACGGCGGCGGGTTCTACTCCATATGGGCCACGTCATCCACACTCCCCCGGCTATGCAGCTTGGAGTCCAGCAGAATGGTCCACGTGGACGGAAGATTCTACTGCATGAACTATAGCCCATTCAGCATCTTAGCATACGACATGTCGGAGAACAAATGGTGGAAGATCCAAGCGCCGATGCGTCGGTTCTTACGGTCTCCAAATTTGTTGGAGAGCAGAGGGAAGTTGGTGTTAATGGCGGCGGTGGAGAAGAGCAAGCTGAATGTTCCAAAGAGCTTAAGGGTATGGGCCCTACAAGGGTGTGGGATGACGTGGATAGAAATGGAGAGAATGCCACATCAGCTCTACGTGGAGTTTGAGGGGATTGAGAAAGGGAGTGGATTTGATTGCGTGGCACATGGGGAATTTGTGGTGATTATGATAAAAGGGTGTTGGGATAAGGCTGCGCTTTTGTATGACGTGTGCAAGAGGACGTGGCAGTGGATTCCACCGTGTCCCTATATTGTTGGAAGTAATGATGATGACGGTGAAGACCAAGTGGTGTTGCATGGGTTTGCTTATGATCCGAGGTTGGCCACGCCGGTGACTGGACTCATTCATCAGCTCTCTTCTCTTCCATTTCAGAATTTCAATGCTAATTAA 1311 52.56 MSFINSSITLPFSYNVSGSNRFPGSTSSSPTEPMMDSRIWSKLPERLLDRVVAFLPPPAFFRARCVCKRWYGLLFSAAFLELYLLLPPHRRHWFLFFKLKANKTQIYRNCGGQSRPIYEGYLFNPYDVAWHRLSFALIPPGFSPVAASGGLICWAPDGGGPKTLILSNPILGTLSQLPPTTRPRLFPSIGLAVTPFSVDITIAGDDLISPYAVKNLTAETFHIDGGGFYSIWATSSTLPRLCSLESSRMVHVDGRFYCMNYSPFSILAYDMSENKWWKIQAPMRRFLRSPNLLESRGKLVLMAAVEKSKLNVPKSLRVWALQGCGMTWIEMERMPHQLYVEFEGIEKGSGFDCVAHGEFVVIMIKGCWDKAALLYDVCKRTWQWIPPCPYIVGSNDDDGEDQVVLHGFAYDPRLATPVTGLIHQLSSLPFQNFNAN 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8399822 8401132 - Cp4.1LG09g09370.1 Cpe09g00935 475301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00935 436 Pfam F-box domain 40 71 IPR001810 GO:0005515
Cpe09g00935 436 ProSiteProfiles F-box domain profile. 37 86 IPR001810 GO:0005515
Cpe09g00935 436 PANTHER F-BOX/KELCH-REPEAT PROTEIN 40 415 - -
Cpe09g00935 436 SUPERFAMILY F-box domain 25 92 IPR036047 GO:0005515
Cpe09g00935 436 SUPERFAMILY Galactose oxidase, central domain 120 396 IPR011043 -
Cpe09g00935 436 SMART fbox_2 43 83 IPR001810 GO:0005515
Cpe09g00935 436 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 40 415 - -
Cpe09g00935 436 Gene3D - 35 80 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00935 Cpe-Chr9:8399822 Cpe13g00993 Cpe-Chr13:8208739 4.50E-29 dispersed
Cpe03g01132 Cpe-Chr3:9275711 Cpe09g00935 Cpe-Chr9:8399822 1.28E-19 transposed
Cpe20g00277 Cpe-Chr20:1553934 Cpe09g00935 Cpe-Chr9:8399822 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00935 - - cmos:111456693 838.565