Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00944 GAATTGGATGAAAGGAAAGAAGGAGATGAAAAGGGCAAAACGGGGAAAAAAGAGGAGAAAAAGGGTTCAGAAGATGGTGCTCCGACGGGTTATATTCACGTCAGAGCTAAGAGGGGCCAAGCCACTGATAGCCACAGCCTTGCTGAGAGGGTAACAGGGAAAGCGCTCATGTTGGATGAAATTATCAACTATGTTCAGTCTCTACAAAATCAAGTTGAGTTTCTCTCCATGAAGCTCACTTCTTTGAACCCAATTCTCTTCGACTTCAGAATGGACTTAGACGGCCTCATGATCCAACCCGAGCATTTCTTGCACTCACTTTCTCCAAACCTTCCATCAATGGCAGCCTTTTCATATCAATACCAACCTTTTCTTCTTGACTCAATCCTTCAAGCCAACAATCCCCTCAAAATGGGTGGCTTTTTGGATGAACCAAATTTCAATATCAATTGTTTCACTCAATTCTTCGCTCAAGAACAAGAACAAGAACAACCCATTCACCGTTTTCCCGAGCTTTGTAAACGGAGCCCTGAATCTTTTAGTTTGGTCGAGAAATCCGATAGCGGTGAGCCGCCGGTCGTAAGTCAATTGAAGCCGACTGTGACTTCCCCTTGTAGTAAGAAAAGAAAGAGCCGTGGAAATAACTCCTCCGCTTGCTCCGCCCAATCTAAGGTGAAAACTAAAAGGGAATTGGATGAAAGGAAAGAAGGAGATGAAAAGGGCAAAACGGGGAAAAAAGAGGAGAAAAAGGGTTCAGAAGATGGTGCTCCGACGGGTTATATTCACGTCAGAGCTAAGAGGGGCCAAGCCACTGATAGCCACAGCCTTGCTGAGAGGGTAACAGGGAAAGCGCTCATGTTGGATGAAATTATCAACTATGTTCAGTCTCTACAAAATCAAGTTGAGTTTCTCTCCATGAAGCTCACTTCTTTGAACCCAATTCTCTTCGACTTCAGAATGGACTTAGACGGCCTCATGATCCAACCCGAGTCATCGTCCTTGAGTAGCATAACGCCACAACTACCCGCAATGGCGCAATGCAACGTCATATCACCACCAACATTGATCGACACCACCACAACAACAACACCAACCCCAACAATCGCCACAAATACCTATCCACTAACCGACAATTCAGCTAATTTGTTTCTATTCCAACAAGCGATGAATCCAAACGCATACACTCAATCTCAGGACAACGTTAAGGTTTCATCATGGGACGTGGAAGAACATAAACGAAAGCTTCTTATTTCATCAGGAATTGGCGACAACTTGAGCTACTTCCATTAA 1290 44.42 ELDERKEGDEKGKTGKKEEKKGSEDGAPTGYIHVRAKRGQATDSHSLAERVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPILFDFRMDLDGLMIQPEHFLHSLSPNLPSMAAFSYQYQPFLLDSILQANNPLKMGGFLDEPNFNINCFTQFFAQEQEQEQPIHRFPELCKRSPESFSLVEKSDSGEPPVVSQLKPTVTSPCSKKRKSRGNNSSACSAQSKVKTKRELDERKEGDEKGKTGKKEEKKGSEDGAPTGYIHVRAKRGQATDSHSLAERVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLNPILFDFRMDLDGLMIQPESSSLSSITPQLPAMAQCNVISPPTLIDTTTTTTPTPTIATNTYPLTDNSANLFLFQQAMNPNAYTQSQDNVKVSSWDVEEHKRKLLISSGIGDNLSYFH 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8454037 8457750 + Cp4.1LG09g09490.1 Cpe09g00944 475310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00944 429 MobiDBLite consensus disorder prediction 193 224 - -
Cpe09g00944 429 MobiDBLite consensus disorder prediction 1 30 - -
Cpe09g00944 429 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 114 280 - -
Cpe09g00944 429 MobiDBLite consensus disorder prediction 1 26 - -
Cpe09g00944 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 279 429 IPR024097 GO:0006355
Cpe09g00944 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 114 280 IPR024097 GO:0006355
Cpe09g00944 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 5 51 IPR024097 GO:0006355
Cpe09g00944 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 50 108 IPR024097 GO:0006355
Cpe09g00944 429 MobiDBLite consensus disorder prediction 180 259 - -
Cpe09g00944 429 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 279 429 - -
Cpe09g00944 429 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 5 51 - -
Cpe09g00944 429 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 50 108 - -
Cpe09g00944 429 MobiDBLite consensus disorder prediction 225 255 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00944 Cpe20g00290 CCT
Cpe09g00944 Cpe18g00931 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00944 Cpe-Chr9:8454037 Cpe03g01282 Cpe-Chr3:10393240 4.51E-25 dispersed
Cpe18g00931 Cpe-Chr18:8230223 Cpe09g00944 Cpe-Chr9:8454037 6.73E-27 wgd
Cpe20g00290 Cpe-Chr20:1619873 Cpe09g00944 Cpe-Chr9:8454037 9.01E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00944 - K18878 csv:101205943 377.867