Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00946 ATGGGTTGCGTTCTTGGCAGACAAGTCGCCAATGATTCCCGGAGCCCATCCAGACCTCCCCGTCGCCGTCGGAGCACTGATCACCACTCTCATGTCGACGGAGTTAATGGCAAGAGTGTTATGGAACAGAGGATATCGGCAGAAAAACAAGGAGTTAGGCAGGATGTGGATTCCTTGTCTGTAGAGCACCGGAGGCCTTCACCGAGTATTTGTCAGAGAAATGAGCAAGGCTGGCCGGCGTGGTTGCTAGAGGTTGCCGGTGAGGTGATGGAAGACTGGACGCCTCGTCGAGCTAATACATTTGAGAAGCTTGCTAAAATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACCGGCAAAATTGTTGCTCTGAAGAAGGTCAGGTTTGATAATTTAGAACCGGAGAGCGTAAGATTTATGGCCAGAGAGATTTTGGTTCTGAGACGCCTCGATCATCCCAATGTGCTTAAGCTTGAGGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTGTTCGAGTATATGGAACACGACCTCGCTGGACTTGCTGCCGGACAAGGAGTCAAGTTCACGGAACCTCAGGTTAAATGCTACATGAAGCAATTATTGTCTGGGCTTGAACATTGTCACAATCGAGGAGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGACAACGAAGGAATACTTAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCTCAACAGAAGCAACATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCTCCTGAACTATTGCTTGGAGCTACTCTTTATGGTATAGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCCGAGCTGCTCGCTGGGAGGCCAATCATGCCAGGAAGGACAGAGGTTGAACAACTCCATAAGATATTTAAATTGTGTGGTTCTCCAACGGAGGATTACTGGAAGAAATACAAATTGCCGAATGCAACTCTTTTTAAACCCCAACATCCATACAAACGCTGCATTGCGGAAACATTCAAGGATTTTCCATCTTCTTCTCTACCTCTCATCGAATCTCTCCTTACAATGGACCCTGATGGGCGAGGTACTGCCTCTGCTGCTCTCAATAGCGAATTCTTCACTACCAACCCTCTTGCTTGTGAACCATCAAGTCTGCCTAAATATCCTCCATGCAAAGAATTGGATATAAAGTTGAGAGATGAGGAGGCTAGAAGACAAGTCGCCAATGATTCCCGGAGCCCATCCAGACCTCCCCGTCGCCGTCGGAGCACTGATCACCACTCTCATGTCGACGGAGTTAATGGCAAGAGTGTTATGGAACAGAGGATATCGGCAGAAAAACAAGGAGTTAGGCAGGATGTGGATTCCTTGTCTGTAGAGCACCGGAGGCCTTCACCGAGTATTTGTCAGAGAAATGAGCAAGGCTGGCCGGCGTGGTTGCTAGAGGTTGCCGGTGAGGTGATGGAAGACTGGACGCCTCGTCGAGCTAATACATTTGAGAAGCTTGCTAAAATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACCGGCAAAATTGTTGCTCTGAAGAAGGTCAGGTTTGATAATTTAGAACCGGAGAGCGTAAGATTTATGGCCAGAGAGATTTTGGTTCTGAGACGCCTCGATCATCCCAATGTGCTTAAGCTTGAGGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTGTTCGAGTATATGGAACACGACCTCGCTGGACTTGCTGCCGGACAAGGAGTCAAGTTCACGGAACCTCAGGTTAAATGCTACATGAAGCAATTATTGTCTGGGCTTGAACATTGTCACAATCGAGGAGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGACAACGAAGGAATACTTAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCTCAACAGAAGCAACATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCTCCTGAACTATTGCTTGGAGCTACTCTTTATGGTATAGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCCGAGCTGCTCGCTGGGAGGCCAATCATGCCAGGAAGGACAGAGGTTGAACAACTCCATAAGATATTTAAATTGTGTGGTTCTCCAACGGAGGATTACTGGAAGAAATACAAATTGCCGAATGCAACTCTTTTTAAACCCCAACATCCATACAAACGCTGCATTGCGGAAACATTCAAGGATTTTCCATCTTCTTCTCTACCTCTCATCGAATCTCTCCTTACAATGGACCCTGATGGGCGAGGTACTGCCTCTGCTGCTCTCAATAGCGAATTCTTCACTACCAACCCTCTTGCTTGTGAACCATCAAGTCTGCCTAAATATCCTCCATGCAAAGAATTGGATATAAAGTTGAGAGATGAGGAGGCTAGAAGGCGAAGAAGACTAAGTGGTAAAGCAACAGCTGCTGATGGTGGTGGCAGGAGAGTACGAAGGTGGAGAAACACGACCAAATCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCCCCACCCCATCAAGATGGGGCAGTAGGGTATCCGCCACATGAGACATCCCAGAGGGGCCATTCATCATTTGGCGCAGCTGATGCTTCATTCAGCTCCTCCATCTTTAGTTCAAAGTCTGAATCTATCAAAACTACAGGAGCTCCAGAGGGACCTTCCCGGAGAAAGAGAACCAACAGAGATACTTCATCTCGAAAATTCATGCGTGCACTCAAGCCATCAATCGGGCTATCAATGGATCTGTTGTTTAGAGGTAAATAA 2850 46.39 MGCVLGRQVANDSRSPSRPPRRRRSTDHHSHVDGVNGKSVMEQRISAEKQGVRQDVDSLSVEHRRPSPSICQRNEQGWPAWLLEVAGEVMEDWTPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPQQKQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPTEDYWKKYKLPNATLFKPQHPYKRCIAETFKDFPSSSLPLIESLLTMDPDGRGTASAALNSEFFTTNPLACEPSSLPKYPPCKELDIKLRDEEARRQVANDSRSPSRPPRRRRSTDHHSHVDGVNGKSVMEQRISAEKQGVRQDVDSLSVEHRRPSPSICQRNEQGWPAWLLEVAGEVMEDWTPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPQQKQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPTEDYWKKYKLPNATLFKPQHPYKRCIAETFKDFPSSSLPLIESLLTMDPDGRGTASAALNSEFFTTNPLACEPSSLPKYPPCKELDIKLRDEEARRRRRLSGKATAADGGGRRVRRWRNTTKSNAKSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFRGK 949
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8476261 8484995 + Cp4.1LG09g09500.1 Cpe09g00946 475312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00946 949 MobiDBLite consensus disorder prediction 827 931 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 458 472 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 16 35 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 48 62 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 827 846 - -
Cpe09g00946 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Cpe09g00946 949 CDD STKc_CDK9_like 101 385 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 1 70 - -
Cpe09g00946 949 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Cpe09g00946 949 PANTHER CELL DIVISION PROTEIN KINASE 482 905 - -
Cpe09g00946 949 PANTHER CELL DIVISION PROTEIN KINASE 65 458 - -
Cpe09g00946 949 Gene3D Transferase(Phosphotransferase) domain 1 594 834 - -
Cpe09g00946 949 Gene3D Transferase(Phosphotransferase) domain 1 184 425 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 412 445 - -
Cpe09g00946 949 Pfam Protein kinase domain 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 Pfam Protein kinase domain 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 SMART serkin_6 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 SMART serkin_6 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 Coils Coil 947 949 - -
Cpe09g00946 949 CDD STKc_CDK9_like 511 795 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 412 481 - -
Cpe09g00946 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Cpe09g00946 949 ProSiteProfiles Protein kinase domain profile. 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
Cpe09g00946 949 Gene3D Phosphorylase Kinase; domain 1 497 593 - -
Cpe09g00946 949 Gene3D Phosphorylase Kinase; domain 1 87 183 - -
Cpe09g00946 949 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00946 949 SUPERFAMILY Protein kinase-like (PK-like) 505 800 IPR011009 -
Cpe09g00946 949 SUPERFAMILY Protein kinase-like (PK-like) 95 390 IPR011009 -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 913 930 - -
Cpe09g00946 949 PANTHER OS02G0559300 PROTEIN 65 458 - -
Cpe09g00946 949 PANTHER OS02G0559300 PROTEIN 482 905 - -
Cpe09g00946 949 MobiDBLite consensus disorder prediction 879 910 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00946 Cpe20g00292 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00946 Cpe-Chr9:8476261 Cpe20g00292 Cpe-Chr20:1630422 0 dispersed
Cpe20g00291 Cpe-Chr20:1628395 Cpe09g00946 Cpe-Chr9:8476261 4.27E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62621 PF00069 Pkinase 1.40E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00946 K08819 - csv:101205716 872.848