Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00946 | ATGGGTTGCGTTCTTGGCAGACAAGTCGCCAATGATTCCCGGAGCCCATCCAGACCTCCCCGTCGCCGTCGGAGCACTGATCACCACTCTCATGTCGACGGAGTTAATGGCAAGAGTGTTATGGAACAGAGGATATCGGCAGAAAAACAAGGAGTTAGGCAGGATGTGGATTCCTTGTCTGTAGAGCACCGGAGGCCTTCACCGAGTATTTGTCAGAGAAATGAGCAAGGCTGGCCGGCGTGGTTGCTAGAGGTTGCCGGTGAGGTGATGGAAGACTGGACGCCTCGTCGAGCTAATACATTTGAGAAGCTTGCTAAAATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACCGGCAAAATTGTTGCTCTGAAGAAGGTCAGGTTTGATAATTTAGAACCGGAGAGCGTAAGATTTATGGCCAGAGAGATTTTGGTTCTGAGACGCCTCGATCATCCCAATGTGCTTAAGCTTGAGGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTGTTCGAGTATATGGAACACGACCTCGCTGGACTTGCTGCCGGACAAGGAGTCAAGTTCACGGAACCTCAGGTTAAATGCTACATGAAGCAATTATTGTCTGGGCTTGAACATTGTCACAATCGAGGAGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGACAACGAAGGAATACTTAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCTCAACAGAAGCAACATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCTCCTGAACTATTGCTTGGAGCTACTCTTTATGGTATAGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCCGAGCTGCTCGCTGGGAGGCCAATCATGCCAGGAAGGACAGAGGTTGAACAACTCCATAAGATATTTAAATTGTGTGGTTCTCCAACGGAGGATTACTGGAAGAAATACAAATTGCCGAATGCAACTCTTTTTAAACCCCAACATCCATACAAACGCTGCATTGCGGAAACATTCAAGGATTTTCCATCTTCTTCTCTACCTCTCATCGAATCTCTCCTTACAATGGACCCTGATGGGCGAGGTACTGCCTCTGCTGCTCTCAATAGCGAATTCTTCACTACCAACCCTCTTGCTTGTGAACCATCAAGTCTGCCTAAATATCCTCCATGCAAAGAATTGGATATAAAGTTGAGAGATGAGGAGGCTAGAAGACAAGTCGCCAATGATTCCCGGAGCCCATCCAGACCTCCCCGTCGCCGTCGGAGCACTGATCACCACTCTCATGTCGACGGAGTTAATGGCAAGAGTGTTATGGAACAGAGGATATCGGCAGAAAAACAAGGAGTTAGGCAGGATGTGGATTCCTTGTCTGTAGAGCACCGGAGGCCTTCACCGAGTATTTGTCAGAGAAATGAGCAAGGCTGGCCGGCGTGGTTGCTAGAGGTTGCCGGTGAGGTGATGGAAGACTGGACGCCTCGTCGAGCTAATACATTTGAGAAGCTTGCTAAAATAGGGCAAGGGACGTATAGCAATGTGTACAAGGCGAGGGATCTTATTACCGGCAAAATTGTTGCTCTGAAGAAGGTCAGGTTTGATAATTTAGAACCGGAGAGCGTAAGATTTATGGCCAGAGAGATTTTGGTTCTGAGACGCCTCGATCATCCCAATGTGCTTAAGCTTGAGGGCTTAGTTACTTCCAGAATGTCGTGTAGTCTTTACTTAGTGTTCGAGTATATGGAACACGACCTCGCTGGACTTGCTGCCGGACAAGGAGTCAAGTTCACGGAACCTCAGGTTAAATGCTACATGAAGCAATTATTGTCTGGGCTTGAACATTGTCACAATCGAGGAGTTTTGCATCGTGATATAAAGGGTTCCAATTTGCTAATTGACAACGAAGGAATACTTAAAATAGCTGATTTTGGGTTAGCTACTTTTTTTGATCCTCAACAGAAGCAACATATGACTAGTCGAGTAGTAACCCTTTGGTACCGTCCTCCTGAACTATTGCTTGGAGCTACTCTTTATGGTATAGGGGTTGATCTTTGGAGTGCTGGCTGCATCTTGGCCGAGCTGCTCGCTGGGAGGCCAATCATGCCAGGAAGGACAGAGGTTGAACAACTCCATAAGATATTTAAATTGTGTGGTTCTCCAACGGAGGATTACTGGAAGAAATACAAATTGCCGAATGCAACTCTTTTTAAACCCCAACATCCATACAAACGCTGCATTGCGGAAACATTCAAGGATTTTCCATCTTCTTCTCTACCTCTCATCGAATCTCTCCTTACAATGGACCCTGATGGGCGAGGTACTGCCTCTGCTGCTCTCAATAGCGAATTCTTCACTACCAACCCTCTTGCTTGTGAACCATCAAGTCTGCCTAAATATCCTCCATGCAAAGAATTGGATATAAAGTTGAGAGATGAGGAGGCTAGAAGGCGAAGAAGACTAAGTGGTAAAGCAACAGCTGCTGATGGTGGTGGCAGGAGAGTACGAAGGTGGAGAAACACGACCAAATCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCCCCACCCCATCAAGATGGGGCAGTAGGGTATCCGCCACATGAGACATCCCAGAGGGGCCATTCATCATTTGGCGCAGCTGATGCTTCATTCAGCTCCTCCATCTTTAGTTCAAAGTCTGAATCTATCAAAACTACAGGAGCTCCAGAGGGACCTTCCCGGAGAAAGAGAACCAACAGAGATACTTCATCTCGAAAATTCATGCGTGCACTCAAGCCATCAATCGGGCTATCAATGGATCTGTTGTTTAGAGGTAAATAA | 2850 | 46.39 | MGCVLGRQVANDSRSPSRPPRRRRSTDHHSHVDGVNGKSVMEQRISAEKQGVRQDVDSLSVEHRRPSPSICQRNEQGWPAWLLEVAGEVMEDWTPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPQQKQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPTEDYWKKYKLPNATLFKPQHPYKRCIAETFKDFPSSSLPLIESLLTMDPDGRGTASAALNSEFFTTNPLACEPSSLPKYPPCKELDIKLRDEEARRQVANDSRSPSRPPRRRRSTDHHSHVDGVNGKSVMEQRISAEKQGVRQDVDSLSVEHRRPSPSICQRNEQGWPAWLLEVAGEVMEDWTPRRANTFEKLAKIGQGTYSNVYKARDLITGKIVALKKVRFDNLEPESVRFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPQQKQHMTSRVVTLWYRPPELLLGATLYGIGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPTEDYWKKYKLPNATLFKPQHPYKRCIAETFKDFPSSSLPLIESLLTMDPDGRGTASAALNSEFFTTNPLACEPSSLPKYPPCKELDIKLRDEEARRRRRLSGKATAADGGGRRVRRWRNTTKSNAKSKSEKFPPPHQDGAVGYPPHETSQRGHSSFGAADASFSSSIFSSKSESIKTTGAPEGPSRRKRTNRDTSSRKFMRALKPSIGLSMDLLFRGK | 949 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8476261 | 8484995 | + | Cp4.1LG09g09500.1 | Cpe09g00946 | 475312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 827 | 931 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 458 | 472 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 48 | 62 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 827 | 846 | - | - | |
Cpe09g00946 | 949 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 221 | 233 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe09g00946 | 949 | CDD | STKc_CDK9_like | 101 | 385 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Cpe09g00946 | 949 | ProSitePatterns | Protein kinases ATP-binding region signature. | 107 | 130 | IPR017441 | GO:0005524 | |
Cpe09g00946 | 949 | PANTHER | CELL DIVISION PROTEIN KINASE | 482 | 905 | - | - | |
Cpe09g00946 | 949 | PANTHER | CELL DIVISION PROTEIN KINASE | 65 | 458 | - | - | |
Cpe09g00946 | 949 | Gene3D | Transferase(Phosphotransferase) domain 1 | 594 | 834 | - | - | |
Cpe09g00946 | 949 | Gene3D | Transferase(Phosphotransferase) domain 1 | 184 | 425 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 412 | 445 | - | - | |
Cpe09g00946 | 949 | Pfam | Protein kinase domain | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | Pfam | Protein kinase domain | 511 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | SMART | serkin_6 | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | SMART | serkin_6 | 511 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | Coils | Coil | 947 | 949 | - | - | |
Cpe09g00946 | 949 | CDD | STKc_CDK9_like | 511 | 795 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 412 | 481 | - | - | |
Cpe09g00946 | 949 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 631 | 643 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe09g00946 | 949 | ProSiteProfiles | Protein kinase domain profile. | 101 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | ProSitePatterns | Protein kinases ATP-binding region signature. | 517 | 540 | IPR017441 | GO:0005524 | |
Cpe09g00946 | 949 | Gene3D | Phosphorylase Kinase; domain 1 | 497 | 593 | - | - | |
Cpe09g00946 | 949 | Gene3D | Phosphorylase Kinase; domain 1 | 87 | 183 | - | - | |
Cpe09g00946 | 949 | ProSiteProfiles | Protein kinase domain profile. | 511 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe09g00946 | 949 | SUPERFAMILY | Protein kinase-like (PK-like) | 505 | 800 | IPR011009 | - | |
Cpe09g00946 | 949 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 390 | IPR011009 | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 913 | 930 | - | - | |
Cpe09g00946 | 949 | PANTHER | OS02G0559300 PROTEIN | 65 | 458 | - | - | |
Cpe09g00946 | 949 | PANTHER | OS02G0559300 PROTEIN | 482 | 905 | - | - | |
Cpe09g00946 | 949 | MobiDBLite | consensus disorder prediction | 879 | 910 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g00946 | Cpe20g00292 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g00946 | Cpe-Chr9:8476261 | Cpe20g00292 | Cpe-Chr20:1630422 | 0 | dispersed | |
Cpe20g00291 | Cpe-Chr20:1628395 | Cpe09g00946 | Cpe-Chr9:8476261 | 4.27E-107 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62621 | PF00069 | Pkinase | 1.40E-66 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00946 | K08819 | - | csv:101205716 | 872.848 |