Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00962 ATGGCGACGACGACCACCAGTATTGGCGGCGATGGCGGTGGTGAAGATAGAGTTATGGCTACGGCTCAGCAGATACTGAAGAGTCTCAACACTCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGCTTCGATAATCGTCTATCTAATATCACCAGTTTGGTCAACAGTGGAGATTCGAAGAGGGAGGGGGATCGATTTGAAGCTGCTGAGAAAGTGATTCTTCGTTGGGATTCCGGTCAGGGAGCTTCTCGGAACTCCCTGTTTTGGGAGGACGCGCCGGATGAGGCAGTGGAGTACTTATCGGCGGTGGATGATATTCTTCACTGGATGGACGAGTTGTCAATTCAGTCTGATTCGGCTAAGATCGTCGAGCGTGCTGAGAACGCGATCCAGATCGCTATGTCGCGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAACACCGTTCCGCTCGATGCGGAGCATCTCCACGGTTCAATTCGTAGGGTTTCCCTCTCTTTTGCTTCACACGAAGGCGAAAATTCCGATGAGTTCGAATCCTTTGCCGATGTTGACCGTGGTTCGGGGATTTTCCATGAGCGTGGTGTTAGTTTGGGCGACGATTTGCGCGTCGATTTGATCAATCCTGACGCCGTCGATGATCTGAAGGAGATCGTGGACCGAATGATTCGATCTGGATACGAAAGAGAGTGTCTGAATGTGTATATTAGCGTCCGCCGCGATGCTTTAGATGAGTGCTTGGTTGTTCTTGGAGTTGAGAAGCTTGGAATTGAGGATATCCAGAAGATTGACTGGAAATCTTTGGATGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTTCTTTTGACCGGCGAGAAACGACTCTGTGATTATATCTTTAGTGGTTCCGATGACTCTGAGGAAGCTTGTTTCAATGAGATTGCCAAAGGGTGCGTCAGGAAATTACTCAATTTTGCAGAGGCCATTGCTATAGGGGAAAGATCAGTCGAGAAGCTATTTCGAATTCTCGATATGTATGAAGCTCTGGCATACGTTCTACCGGACTTGCAGGCTATGGTTCCCGATGAAATCGTGATCGACGAGGCGAAGGGAGTGCTTTCTAGGCTGGGAGAGGCTGCTAAAGGTACATTTTGTGAATTTGAGAATGCTGTTCGTAGTGAGACTTCTAAGAAAACGATGCTAAATGCTGAGATTCATCCGCTCGCTCGTTACGTCATGAATTACTTAAGATTGCTTGTTGTTTATAGCAACACTCTGGATGAACTTTTAGAAGGCGATGACGACGAGGATTCGCGTCGTATAGGGGATGATGGTGGTTTGAATTTGGAGCTAGAAACCATGTCTCCGTTAGCTCGTCGATTGTTTTCATTGATAGCGTCATTGGAGAGCAATCTTGAGAGGAAATCCAAACTTTATGCGGATGATTCGTTGCAATATATATTTCTCATGAACAATATACAATATATAGTGCAGAAAGTGAAAGATTCTGAGCTTGGGAAGCTCTTGGGTGACCGTTGGGTCCGTAAGCGTCGAGGCCAGGTTCGGGTATATGCAACGAGCTATCTAAGGGCTTCGTGGGGCAGATTGTTATCTTTCTTGAAGGAAGAAGGGACTGGTGGGAGCTCTAATAGTGCACTGAAACTAGCTGCTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAACTCTATAGAGTTCAGACAGGTTGGAAGGTAGCAGATCCTCAACTACGAGAAGAGCTTCGAATTTCGATATCGGCAAAGGCGTTACCTGCATATCGTGCCTTCGTGGGAAGGCATGGAAGTCAGATAGAGAACACGAGACATGCCGGGAGGTATATAAAGTACAGTTCGGACGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCAGCTTGTGTTCTAAATCACTTACGAAGAAAAAGTAGTTCATAG 1971 46.02 MATTTTSIGGDGGGEDRVMATAQQILKSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKREGDRFEAAEKVILRWDSGQGASRNSLFWEDAPDEAVEYLSAVDDILHWMDELSIQSDSAKIVERAENAIQIAMSRLEDEFRHMLIRNTVPLDAEHLHGSIRRVSLSFASHEGENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLINPDAVDDLKEIVDRMIRSGYERECLNVYISVRRDALDECLVVLGVEKLGIEDIQKIDWKSLDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEACFNEIAKGCVRKLLNFAEAIAIGERSVEKLFRILDMYEALAYVLPDLQAMVPDEIVIDEAKGVLSRLGEAAKGTFCEFENAVRSETSKKTMLNAEIHPLARYVMNYLRLLVVYSNTLDELLEGDDDEDSRRIGDDGGLNLELETMSPLARRLFSLIASLESNLERKSKLYADDSLQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRVYATSYLRASWGRLLSFLKEEGTGGSSNSALKLAALKEKFKNFNAGFEELYRVQTGWKVADPQLREELRISISAKALPAYRAFVGRHGSQIENTRHAGRYIKYSSDDLENYLLDLFEGSACVLNHLRRKSSS 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8594080 8596050 + Cp4.1LG09g09560.1 Cpe09g00962 475328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00962 656 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 654 - -
Cpe09g00962 656 SUPERFAMILY Cullin repeat-like 67 641 IPR016159 -
Cpe09g00962 656 Gene3D Exocyst complex component Exo70 85 646 - -
Cpe09g00962 656 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 654 IPR004140 GO:0000145|GO:0006887
Cpe09g00962 656 Pfam Exo70 exocyst complex subunit 277 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01614 Cpe09g00962 CCT
Cpe09g00962 Cpe20g00308 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01140 Cpe-Chr2:10387370 Cpe09g00962 Cpe-Chr9:8594080 1.40E-120 dispersed
Cpe02g01761 Cpe-Chr2:14340568 Cpe09g00962 Cpe-Chr9:8594080 1.27E-149 dispersed
Cpe03g01013 Cpe-Chr3:8277352 Cpe09g00962 Cpe-Chr9:8594080 1.54E-154 dispersed
Cpe04g01614 Cpe-Chr4:12537686 Cpe09g00962 Cpe-Chr9:8594080 0 dispersed
Cpe09g00962 Cpe-Chr9:8594080 Cpe20g00898 Cpe-Chr20:7983527 4.18E-120 dispersed
Cpe20g00075 Cpe-Chr20:397470 Cpe09g00962 Cpe-Chr9:8594080 3.97E-129 transposed
Cpe18g00900 Cpe-Chr18:8087530 Cpe09g00962 Cpe-Chr9:8594080 0 wgd
Cpe20g00308 Cpe-Chr20:1732404 Cpe09g00962 Cpe-Chr9:8594080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00962 K07195 - csv:101212753 1090.49