Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00974 CCACGCAATTTCACTCTTCCGAGCTCTCAACTTACAGTAATGGCGGATCGAGATCGGAAGCTCAAAGCGGCGGTACATTCCGTTGATCCTCGGAGTGGTTTCTGTCCTCAAACCAAGATTTTCCATAGCCTCCGTCCACCGCTCTCGGTTCCGCCGATATCTCAGCCTCTCACTGTTGTCGGACACGCACTTTCTATTCTTCGATCATCCCCTCCTCCGGTGAACACTACCGCTCTTGTTGATTTCGACTCAGGTGACAGTATCTCCTACGGTATTTTCCTCTGCCAAATCCGAAACCTCGCCTTTAATCTTAGAACTGTTTTCTCCCTCTCCAAGGGTCAAGTTGCTTTTATTCTTTCGCCGACGTCTCTGCGAGTTCCTGTGTTGTATTTTGCTCTGTTATCGCTCGGTGTTGTTGTCTCTCCGGCTAATCCAATCGGTTCTGAATCGGAGATTGCTCACCAGGTTCGACTCTGTAAACCGGACATTGCCTTCGTTACTTCCTCAACGGCGTCCAAGCTTTCGAGGGTTCCAGTTTCCACTGTCTTGATTGATTCAATGAAGTTTCTATCTATGATGAATGAAAGCAATCTATCGAATGGAGTGGATGATGATGCTGTTGATGTCAAAGTCGATCAAAACGACTCGGCGGCAATTTTGTACTCGTCAGGGACTACCGGGCGAGTGAAAGGAGTCTTACTGTCTCACAGGAACCTCATAGCGGCGATCTCTAGTGTTATGACATTAGAGGCGACGGCCGACGAAAGAGAGACGGAGCCGCATCCCGTTTCTCTGTACCTGTTACCTATGTTCCATGTTTTCGGATTCTATATGATGATTCGATCGATTTCAGAAGGCCATACGCTGGTTCTGATGCGAAAGTTCGGTTTCGAGGAAATGTTAAGAGCCGTGGAGAAGTATAGGGTTACATACATCCCGGTTTCTCCCCCGCTGGTGGTGGCGATGGTCAAGTCGGAGCTGGTGGCCAAGTACGATCTCAGCTCTCTTCAAATTTTGGGATGCGGCGGCGCTCCTCTTGGGAAAGAAGTCGTCGATAAATTCCATGAAAAGTTTCCCAACGTAGAAATTATACAGGGATATGGCTTGACAGAGAGTTCAGCAGCGGCGGCAAGGACTGTGGGGCCTGAAGAATGCAGTAATACAAGTTCAGTAGGTCGCTTATCTGAAAATCTGGAAGCCAAAATAGTGGATCCTGCAACTGGAGAGGCCTTACCTCCTGGTCACAAGGGTGAGCTTTGGCTGCGAGGCCCAGGAATCATGAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCACCAGCTGAACTTGAACATTTACTTCAATCCAACCCCGAGATCGCCGACGCTGCTGTTGCACCGTACAAGAAAATCCGGAGGGTGTCTTTTGTGAACACGATCCCGAAATCGCCTGCAGGGAAGATTCTTAGGAGGGAGCTTATCAAACATGCGCTCTCTCATGGTTCTAGCAAGGCAAGGAAGCCTTTATCTTACTATCTTTAG 1521 48.65 PRNFTLPSSQLTVMADRDRKLKAAVHSVDPRSGFCPQTKIFHSLRPPLSVPPISQPLTVVGHALSILRSSPPPVNTTALVDFDSGDSISYGIFLCQIRNLAFNLRTVFSLSKGQVAFILSPTSLRVPVLYFALLSLGVVVSPANPIGSESEIAHQVRLCKPDIAFVTSSTASKLSRVPVSTVLIDSMKFLSMMNESNLSNGVDDDAVDVKVDQNDSAAILYSSGTTGRVKGVLLSHRNLIAAISSVMTLEATADERETEPHPVSLYLLPMFHVFGFYMMIRSISEGHTLVLMRKFGFEEMLRAVEKYRVTYIPVSPPLVVAMVKSELVAKYDLSSLQILGCGGAPLGKEVVDKFHEKFPNVEIIQGYGLTESSAAAARTVGPEECSNTSSVGRLSENLEAKIVDPATGEALPPGHKGELWLRGPGIMKELIKYKAYQVPPAELEHLLQSNPEIADAAVAPYKKIRRVSFVNTIPKSPAGKILRRELIKHALSHGSSKARKPLSYYL 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8675363 8681070 + Cp4.1LG09g09760.1 Cpe09g00974 475340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00974 506 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Cpe09g00974 506 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 43 429 - -
Cpe09g00974 506 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 427 461 - -
Cpe09g00974 506 Gene3D - 90 235 - -
Cpe09g00974 506 Gene3D - 432 495 IPR045851 -
Cpe09g00974 506 Gene3D - 85 384 - -
Cpe09g00974 506 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 43 429 - -
Cpe09g00974 506 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 427 461 - -
Cpe09g00974 506 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 458 488 - -
Cpe09g00974 506 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 458 488 - -
Cpe09g00974 506 Gene3D Luciferase; Domain 3 385 429 - -
Cpe09g00974 506 Pfam AMP-binding enzyme 75 432 IPR000873 -
Cpe09g00974 506 SUPERFAMILY Acetyl-CoA synthetase-like 75 492 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00974 Cpe20g00318 CCT
Cpe09g00974 Cpe20g00318 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00598 Cpe-Chr9:4145298 Cpe09g00974 Cpe-Chr9:8675363 1.98E-29 dispersed
Cpe09g00974 Cpe-Chr9:8675363 Cpe15g00179 Cpe-Chr15:1464272 2.65E-81 dispersed
Cpe01g01259 Cpe-Chr1:7535054 Cpe09g00974 Cpe-Chr9:8675363 1.39E-24 transposed
Cpe11g00592 Cpe-Chr11:3543440 Cpe09g00974 Cpe-Chr9:8675363 4.48E-10 transposed
Cpe20g00318 Cpe-Chr20:1796227 Cpe09g00974 Cpe-Chr9:8675363 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00974 K01904 - csv:101211791 726.857