Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01001 ATGTCTCAGGATTTGTCTTTGGATCAAGACCCAGATGAATCTGATCCTGAGTTCGTGGAGATTGATCCTACAGGTCGATATGGACGGTATAAGGAAATTTTAGGGAAAGGGGCATTCAAGAAAGTATATCGGGCTTTTGATGAATTGGAGGGAATTGAAGTAGCTTGGAATCAGGTTAAAGTAACAGATCTATTACGGAATTCTGAAGATTTGGAGCGACTTTATTCAGAAGTTCATTTGCTCAAGACATTGAAGCACAAGAACATAATCAAATTTTACAATTCATGGGTTGACACGAAGAATGAAAACATCAACTTCATTACTGAGATATTCACTTCAGGGACACTTCGACAATATAGAAAGAAACACAAGCATGTTGATTTGAGAGCACTGAAAAAGTGGTCTAGGCAGATATTAGAGGGCCTTTTGTATCTTCATAGTCATGACCCTCCGGTTATACATAGAGATTTGAAATGTGACAATATCTTTGTCAACGGCAACCAAGGTGAGGTGAAAATTGGTGACTTAGGACTTGCTGCCATTCTTCAACAAGCTCGTTCGGCTCACAGTGGGATAAAGCCAGCTTCATTGGCAAAGGTCACCGATGGGGGAGTTAGAGCATTTATAGAAAAATGTATTGCAAATGTCTCTGATCGCTTGCCTGCAAAAGATCTTTTAAGAGATCCATTTCTTCTAGCAGATGAAGATCATGAAAGTATATCACGTCATCTACATCCCAAAATACACCATAAAGAGAAAAGAGAACAAATTGATACTGATACAAGCGTAGATGATACTCCTGCTACTAGCGTAGACTTCAGCATGCATGGTCAAAGAAAAGATGTTAACAAGATATTTCTCAAACTAAGAATTGCAGACTCCATGGAAGTTGTCATTTCTGATAGCTCTCCATCTGATTCAAGAACTGCTGCCTCTCCCATATCTATAGAATCTGGTAACCTTGCATTAGAGGTCCTGCCTTCAGGTCGCAAGTATTGGTCCGACTCGCCGAAGGGAGTGGGCGGGTGCTCTCCCGTTAAGCCAGGTCCTTCAAACTTGTCTTTTGCCTCAGAACAGAATGTTGAATCCTCTAGTAGCCACATGCATGAGGATAACATAGATCATGCAGCCATAATCATGGGACTAGAAAATGAGCTTTTGTCTGAAGATGCTGCTAATGATGGGCAGGATGAGAGTATATTAACTACAGATATTCATGCTAGCTCTGAGGCACATCCCTCAGATTATGATGAATCAATTGGCATCGAGATAATGACCGAAAAACTCGAAAATTTGTTGACACAGCAAAAAGAAGAATTAGATGAACTGAAAACCAAACAGAAATTAGCCATTTCAGAGCTTCTGGCTGAACTTACACCTGAGACCCATCAGAAAGTTTTGAAGATATGTAAGCTTAAGCATTCTGAT 1428 40.2 MSQDLSLDQDPDESDPEFVEIDPTGRYGRYKEILGKGAFKKVYRAFDELEGIEVAWNQVKVTDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSGIKPASLAKVTDGGVRAFIEKCIANVSDRLPAKDLLRDPFLLADEDHESISRHLHPKIHHKEKREQIDTDTSVDDTPATSVDFSMHGQRKDVNKIFLKLRIADSMEVVISDSSPSDSRTAASPISIESGNLALEVLPSGRKYWSDSPKGVGGCSPVKPGPSNLSFASEQNVESSSSHMHEDNIDHAAIIMGLENELLSEDAANDGQDESILTTDIHASSEAHPSDYDESIGIEIMTEKLENLLTQQKEELDELKTKQKLAISELLAELTPETHQKVLKICKLKHSD 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8877785 8881461 + Cp4.1LG09g10060.1 Cpe09g01001 475367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 190 305 - -
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 317 474 - -
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 7 192 - -
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 192 - -
Cpe09g01001 476 ProSiteProfiles Protein kinase domain profile. 28 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01001 476 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Cpe09g01001 476 Pfam Protein kinase domain 31 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01001 476 Gene3D Transferase(Phosphotransferase) domain 1 111 196 - -
Cpe09g01001 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Cpe09g01001 476 MobiDBLite consensus disorder prediction 1 21 - -
Cpe09g01001 476 Coils Coil 422 453 - -
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 190 305 - -
Cpe09g01001 476 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 317 474 - -
Cpe09g01001 476 SMART serkin_6 28 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01001 476 SUPERFAMILY Protein kinase-like (PK-like) 24 248 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g01001 Cpe20g00266 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01001 Cpe-Chr5:6540824 Cpe09g01001 Cpe-Chr9:8877785 1.91E-77 dispersed
Cpe09g01001 Cpe-Chr9:8877785 Cpe10g00999 Cpe-Chr10:5691363 5.47E-97 dispersed
Cpe16g00392 Cpe-Chr16:5495339 Cpe09g01001 Cpe-Chr9:8877785 4.56E-67 dispersed
Cpe16g00685 Cpe-Chr16:7098204 Cpe09g01001 Cpe-Chr9:8877785 7.04E-69 dispersed
Cpe03g01800 Cpe-Chr3:13510775 Cpe09g01001 Cpe-Chr9:8877785 1.69E-107 transposed
Cpe04g00042 Cpe-Chr4:420447 Cpe09g01001 Cpe-Chr9:8877785 2.21E-101 transposed
Cpe20g00266 Cpe-Chr20:1491133 Cpe09g01001 Cpe-Chr9:8877785 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62624 PF00069 Pkinase 6.10E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01001 K08867 - csv:101206177 710.294