Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g01023 | ATGCAGAGCTCTGCGGTTACTTTATCGCCTGCTCTTCCTCTTCTCAAGCCACGGAGGCCTTTGAGTTCGTCTTTCAGCTCTGGATGTAACTCAGTTCGGGTATCTTCTTCGTCTTCCTCGAATTCCAGAGATCTCGGAGACCTGAATGATGTTCGTCTCACTTCCTCATGGCCGCAGCGATCTTGGACTCTGTCTTCGTCTCCTTTTTCCTCCGCGAAACTCCGGCCATGGACTGGCGTGCTCTCGCTTGCTTCGGATTCTGATGCGAGTCATTTCAAGGTTCAGGCCACTGCGGTGCCGGATAGCGCAGGAGAGGATGCTAGTGCTGGCGGTAATCTAAGGAAAACGTTGGAGCTCGGGTTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTACAACAAGCAGGTTCTCAAGGTGTTCCCGTTCCCTGTAACTGTCACTGCAGTTCAATTTGCTGTAGGCACTGTACTTGTTCTTCTTATGTGGGGACTTAATCTTTACAAAAAGCCAAAGATCAGTGGTGCTCAGCTTGCTGCTATTCTGCCGCTGGCATTCGTTCACACATTGGGGAACCTTTTTACAAATATGAGTCTTGGGAAAGTAGCAGTATCGTTCACTCACACAATCAAAGCTATGGAGCCATTTTTTTCAGTTATCCTGTCGGCAATGTTTCTTGGAGAGGATTCAATTGACAACATCACCCTCTTTTCAATTATAACGGTCATGTCCTTTTTCTTACTATCCCCTGTGGCTATCTTCATGGAAGGTGTCAAGTTCACTCCTGCATACCTTCAATCAGCCGGTTTGAACATGAACCAACTCTACACTAGGTCGCTTCTAGCTGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATTTTGCAAAGAGTTTCGCCTGTTACCCACTCGGTCGGTAATTGTGTAAAGCGAGTTGTGGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCAGTTTCTCCAATCAACTCTCTTGGCACTGGAGTAGCTCTTGCTGGGGTTTTCCTGTATTCAAGAGTTAAGCGCATCAAAGCTAAGCCAAAGACAGCTTAA | 1089 | 46.65 | MQSSAVTLSPALPLLKPRRPLSSSFSSGCNSVRVSSSSSSNSRDLGDLNDVRLTSSWPQRSWTLSSSPFSSAKLRPWTGVLSLASDSDASHFKVQATAVPDSAGEDASAGGNLRKTLELGLLFGLWYLFNIYFNIYNKQVLKVFPFPVTVTAVQFAVGTVLVLLMWGLNLYKKPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEDSIDNITLFSIITVMSFFLLSPVAIFMEGVKFTPAYLQSAGLNMNQLYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSLGTGVALAGVFLYSRVKRIKAKPKTA | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9014219 | 9017832 | + | Cp4.1LG09g10230.1 | Cpe09g01023 | 475389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g01023 | 362 | PANTHER | SOLUTE CARRIER FAMILY 35 | 69 | 231 | - | - | |
Cpe09g01023 | 362 | Pfam | Triose-phosphate Transporter family | 118 | 232 | IPR004853 | - | |
Cpe09g01023 | 362 | Pfam | Triose-phosphate Transporter family | 233 | 350 | IPR004853 | - | |
Cpe09g01023 | 362 | MobiDBLite | consensus disorder prediction | 20 | 44 | - | - | |
Cpe09g01023 | 362 | PANTHER | SOLUTE CARRIER FAMILY 35 | 233 | 337 | - | - | |
Cpe09g01023 | 362 | PANTHER | TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED | 233 | 337 | - | - | |
Cpe09g01023 | 362 | PANTHER | TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED | 69 | 231 | - | - | |
Cpe09g01023 | 362 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 274 | 353 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g01023 | Cpe20g00246 | CCT | |
Cpe09g01023 | Cpe20g00246 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g01023 | Cpe-Chr9:9014219 | Cpe10g00176 | Cpe-Chr10:1037390 | 8.27E-45 | dispersed | |
Cpe01g02339 | Cpe-Chr1:19640910 | Cpe09g01023 | Cpe-Chr9:9014219 | 3.87E-87 | wgd | |
Cpe20g00246 | Cpe-Chr20:1392890 | Cpe09g01023 | Cpe-Chr9:9014219 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g01023 | K15283 | - | csv:101203848 | 508.064 |