Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01081 ATGCCGCCGAGACGATATGCCGTTGGACGGGCCGATGAGGCCACCCACCCTGACTCCGTTAGAGCCACCTTGGCTGAGTTCCTTTCCACTTTCATCTTCGTCTTTGCCGGAGAAGGCTCCGTCCTCGCTCTCGACTATGGAAGCTACGGTCGTGGTGGTTATGGTTACAGTCATGACCACGGTTACGGTAGAAGGGGAGGCGACACGGGCCGTGGGGCGTCGGATTTAGTAGTAATAGCAATAGCGCATGCATTTGCGCTGTTCTCGGCCGTAGCGGCGAGTATCAACGTCTCCGGTGGGCATGTGAATCCTGCTGTTACATTTGGTGTACTTCTTGGAGGAAGGATATCTCTTATCCGTGCATTCTTCTATTGGGTAGCTCAGATTTTGGGCGCCATTGTGGCTTCCCTGATCTTGAGACTCGCAACGGGTGGCATGAGGCCAATGGGGTTCTTCGTTTCATCGGGCATATCAGAACTGCACGGATTTGTACTAGAGATATTGCTTACATTTGCTTTGGTGTACGTAGTCTACGCAACAGCAATAGACCCGAAGAGGGGAAGTTTGGAAACAATAGCACCACTGGCAATCGGGTTAATAGTCGGGGCGAATATTCTAGTGGGTGGGGTATTTGATGGGGCCTGTATGAACCCGGCCCGGGCCTTTGGGCCGTCGTTAGTGGGCTGGAGATGGGACAACCATTGGATCTACTGGATTGGGCCATTGCTGGGAGGTGGGCTTGCTGCACTTGTCTATGAGTATTTGGTGATTCCAGTTGAACCTCCTGTACATACCCACCACCAGCCTTTAGCTCCGGAAGATTAC 825 52.85 MPPRRYAVGRADEATHPDSVRATLAEFLSTFIFVFAGEGSVLALDYGSYGRGGYGYSHDHGYGRRGGDTGRGASDLVVIAIAHAFALFSAVAASINVSGGHVNPAVTFGVLLGGRISLIRAFFYWVAQILGAIVASLILRLATGGMRPMGFFVSSGISELHGFVLEILLTFALVYVVYATAIDPKRGSLETIAPLAIGLIVGANILVGGVFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPVHTHHQPLAPEDY 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9366928 9368683 - Cp4.1LG09g10890.1 Cpe09g01081 475447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01081 275 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 235 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 198 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 SUPERFAMILY Aquaporin-like 13 265 IPR023271 -
Cpe09g01081 275 Pfam Major intrinsic protein 14 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 Gene3D Glycerol uptake facilitator protein. 5 261 IPR023271 -
Cpe09g01081 275 TIGRFAM MIP: MIP family channel proteins 25 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe09g01081 275 PANTHER - 3 275 - -
Cpe09g01081 275 PANTHER AQUAPORIN-8 3 275 IPR034294 -
Cpe09g01081 275 CDD MIP 21 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01081 Cpe-Chr9:9366928 Cpe10g00246 Cpe-Chr10:1431950 9.41E-99 dispersed
Cpe20g00187 Cpe-Chr20:1083503 Cpe09g01081 Cpe-Chr9:9366928 1.52E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01081 K09873 - csv:101208863 440.269