Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g01101 | ATGGTGGCTCATCTCTCCTCTCTTGACCCTTTGTCTAATTGCTTTCATACCAATGGAACCAATTCCAAAAGAAAAAGACGACCCGCGGGCACTCCCGACCCAGATGCCGAGGTGGTTTCTCTCTCTCCGAAAACCCTATTGGAATCAGATAGTTACGTATGTGAAATATGTCATCAGGGTTTTCAGAGAGATCAAAATCTACAAATGCATCGGCGTCGACATAAGGTGCCGTGGAAGTTATTGAAGAAGACCGAGACGACGACGACGACGACGACAACGCGTAAACGGGTGTTTGTTTGTCCGGAACCGAGCTGCTTACATCATAACCCTACTCATGCTTTGGGGGATTTGGTGGGAATTAAGAAACACTTTAGAAGAAAACATAGTAACCATAAGCAATGGGTATGTGAAAAATGCTCTAAAGGGTATGCTGTTCAATCTGATTACAAAGCTCATCTCAAAACGTGTGGGACTAGAGGCCATTCATGTGACTGTGGTCGAGTCTTCTCAAGGGTGGAGAGTTTCATAGAGCATCAAGATAGTTGCAAATTGGGTCATCATCAACAACCAGAAAAGGAGGCATCTTTACAACCACCACCACCACCACCACCACCTTGTTTATCAAGAACAGCTTCAAGCCCAACTCCAACTCCTTCTTCAGATACAAATTTCAGCTTCTTAAACCAAACCCACACACCAAAAACTCCCCAAAAACTCATCACCCATCATCAAAATTTAGACCTTCAACTTTCAACCTCTTCAAATTCCATTAAAGTTTCAGTTTCTCCAAAAAAACATGAAATTTACTCAACCCATTTGCAGCTTTCAATTGGGTCTTGCAATTATGGTGAAAAAATTGAACAAAAAGATCATTACCAAATGAATTTTGATGAACAAATTGGAAATGGGTTGAATTTATTGAAGCTGAAAGAAGAAGCTAAAGAGAGAATGAGAGTAGCAAGGGAAGAGAAGGCAGTGGCTGAAGAAGCAAGAAATGAAGCAAAGAAACAGATTGAATTGGCTGAGAAAGAGTTAGCCAATGCCAAGAGAATGAGACAACAAGCTCAAGCTGAGCTACAAAGAGCTCTTGCTTTGAAAGAACATGCCATCAACAAAATCAACTCCACCATCCTTCAAATCACTTGCCAAGTTTGTAGGCAACACTTTCATCCATTGCACAAAACTTGA | 1188 | 41.41 | MVAHLSSLDPLSNCFHTNGTNSKRKRRPAGTPDPDAEVVSLSPKTLLESDSYVCEICHQGFQRDQNLQMHRRRHKVPWKLLKKTETTTTTTTTRKRVFVCPEPSCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDSCKLGHHQQPEKEASLQPPPPPPPPCLSRTASSPTPTPSSDTNFSFLNQTHTPKTPQKLITHHQNLDLQLSTSSNSIKVSVSPKKHEIYSTHLQLSIGSCNYGEKIEQKDHYQMNFDEQIGNGLNLLKLKEEAKERMRVAREEKAVAEEARNEAKKQIELAEKELANAKRMRQQAQAELQRALALKEHAINKINSTILQITCQVCRQHFHPLHKT | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9501073 | 9503247 | + | Cp4.1LG09g10940.1 | Cpe09g01101 | 475467 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g01101 | 395 | PANTHER | OS03G0310200 PROTEIN | 4 | 391 | IPR039288 | GO:0009630 | |
Cpe09g01101 | 395 | MobiDBLite | consensus disorder prediction | 183 | 232 | - | - | |
Cpe09g01101 | 395 | MobiDBLite | consensus disorder prediction | 212 | 232 | - | - | |
Cpe09g01101 | 395 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 54 | 74 | IPR013087 | - | |
Cpe09g01101 | 395 | SMART | c2h2final6 | 98 | 128 | IPR013087 | - | |
Cpe09g01101 | 395 | SMART | c2h2final6 | 134 | 161 | IPR013087 | - | |
Cpe09g01101 | 395 | SMART | c2h2final6 | 52 | 74 | IPR013087 | - | |
Cpe09g01101 | 395 | Gene3D | Classic Zinc Finger | 29 | 101 | - | - | |
Cpe09g01101 | 395 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 52 | 74 | IPR013087 | - | |
Cpe09g01101 | 395 | MobiDBLite | consensus disorder prediction | 14 | 38 | - | - | |
Cpe09g01101 | 395 | Coils | Coil | 310 | 372 | - | - | |
Cpe09g01101 | 395 | MobiDBLite | consensus disorder prediction | 194 | 211 | - | - | |
Cpe09g01101 | 395 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 16-LIKE | 4 | 391 | - | - | |
Cpe09g01101 | 395 | SUPERFAMILY | beta-beta-alpha zinc fingers | 49 | 75 | IPR036236 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g01101 | Cpe20g00169 | CCT | |
Cpe09g01101 | Cpe20g00169 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g01101 | Cpe-Chr9:9501073 | Cpe20g00005 | Cpe-Chr20:40531 | 1.08E-155 | dispersed | |
Cpe20g00169 | Cpe-Chr20:959200 | Cpe09g01101 | Cpe-Chr9:9501073 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50045 | None | None | None | None | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g01101 | K25871 | - | csv:101210748 | 545.428 |