Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01107 ATGCGAACCCAGATGGGAAATCGTTTGATTTCTCTGTTGCTCTTCAGTTTCCTTCTTCTACTCCCCACTGTGAAGCCAGATCTTGCTTCTGATAGAACAGCTCTGCTAGCTCTCCGTTCCGCTGTCGGCGGCCGGATTCTTCTTCTCTGGAATGTGACCGATCAGAACACCTGTTCTTGGCCCGGGATTCATTGCGAGGAGAATCGTGTTACTGTTCTTCGTCTTCCCGGCGTGGCGCTTTCTGGTCAGTTACCGGACGGAGTTTTTGGGAACTTGACTCACCTTCGCACTCTCAGTCTTCGGCTCAACGCCCTGTCCGGTCAGCTCCCATCAGATCTCTCTGCTTGCGTTAATCTCCGCAACCTCTATCTACAAGGTAATGAGTTCTCGGGCCTTGTCCCTGATTTCTTGTTCCAGCTCCCTGATCTTGTTCGCCTTAATTTAGCCTCCAATAACTTCTCCGGCGAGATCTCATTGAGCTTCAACAATTTGACTCGTCTTAAGACATTGTTCCTTGAAAACAATCGCTTATCTGGGTCTATCCCGGACTTGAAGATCCCACTAGATCAGTTCAATGTTTCTAACAATCAATTAAATGGGTCGGTTCCAAAGGGTTTGCAATCGTTTTCTTCAAATTCCTTCTTGGGTAATTCTCTCTGTGGGCATCCTCTTGCGGCTTGCCCTGGGGAGAATGGGGATAATATCGATACTAAACACAAGAAAAAGCTCTCAGGAGGAGCCATTGCTGGGATTATCATTGGATCTGTTCTGGGTTTTGTATTGATACTTGTAATCTTAATGCTTTTGTGTCGAAAGAAGAGTGCTAAGGAAACAAGTGCAGTGGATGTTGCCACGGTGAAGCATCCTGAAGTGGAAATTCAGGGCGGTAAGCCACCAGGGGAGGTTGAAAATGGCGGCTACAGTAATGGTTATACTGTGCCAGCCACCGCTGCTGGTGGTGGTGCTGCTGCAACAGTGGCGGCGGGGACTGCAAAGAGGGAAGTGAATGGTAATGGAATTGGCTCCAAAAAACTGGTGTTTTTTGGTAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGAGCTTCAGCGGAAGTGTTGGGAAAAGGAAGCTTTGGGACAGCTTACAAAGCTGTTCTTGAAGTGGGTTCTGTGGTGGCTGTGAAGAGATTGAAGGATGTTACCATAACAGAGAGGGAATTCAGGGACAAGATTGAAGCTGTCGGATCAATGGATCATGAATGTTTGGTCCCTCTCAGAGCTTACTATTTCAGTATGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTGTCTGCTCTTCTACACGGGAACAAAGGAGCTGGTAGGACACCATTGAACTGGGAAATCAGGTCAGGAATCGCTCTTGGCGCTGCTCGTGGCATCGAATATCTTCATTCTCAAGTTTTCGACCTCGAGCTTCTTAGGTACCAAAATGTCGAGGAGGAGATGGTTCAACTATTGCAACTTGCAGTCGATTGCGCTGCTCAATATCCTGATAAGCGTCCTGCAATGTCGGAAGTCACAAAGCGTATACAAGAGCTTCGTCAATCCAGCATTCACGACGTTGCGAATCTACAACCCGATTCGGCTCATGATCCAGACGAGATGGGTTCT 1650 47.52 MRTQMGNRLISLLLFSFLLLLPTVKPDLASDRTALLALRSAVGGRILLLWNVTDQNTCSWPGIHCEENRVTVLRLPGVALSGQLPDGVFGNLTHLRTLSLRLNALSGQLPSDLSACVNLRNLYLQGNEFSGLVPDFLFQLPDLVRLNLASNNFSGEISLSFNNLTRLKTLFLENNRLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSNSFLGNSLCGHPLAACPGENGDNIDTKHKKKLSGGAIAGIIIGSVLGFVLILVILMLLCRKKSAKETSAVDVATVKHPEVEIQGGKPPGEVENGGYSNGYTVPATAAGGGAAATVAAGTAKREVNGNGIGSKKLVFFGNAARVFDLEDLLRASAEVLGKGSFGTAYKAVLEVGSVVAVKRLKDVTITEREFRDKIEAVGSMDHECLVPLRAYYFSMDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPAMSEVTKRIQELRQSSIHDVANLQPDSAHDPDEMGS 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9549259 9551601 + Cp4.1LG09g10980.1 Cpe09g01107 475473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01107 550 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Cpe09g01107 550 ProSiteProfiles Protein kinase domain profile. 362 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01107 550 SUPERFAMILY Protein kinase-like (PK-like) 366 478 IPR011009 -
Cpe09g01107 550 PANTHER OS05G0588300 PROTEIN 9 479 - -
Cpe09g01107 550 PANTHER OS05G0588300 PROTEIN 478 543 - -
Cpe09g01107 550 Gene3D Ribonuclease Inhibitor 144 227 IPR032675 -
Cpe09g01107 550 PANTHER INACTIVE RECEPTOR KINASE-RELATED 9 479 - -
Cpe09g01107 550 PANTHER INACTIVE RECEPTOR KINASE-RELATED 478 543 - -
Cpe09g01107 550 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Cpe09g01107 550 Pfam Leucine rich repeat 83 128 IPR001611 GO:0005515
Cpe09g01107 550 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cpe09g01107 550 Pfam Protein kinase domain 365 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01107 550 SUPERFAMILY L domain-like 30 211 - -
Cpe09g01107 550 Gene3D Transferase(Phosphotransferase) domain 1 348 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01976 Cpe-Chr1:16908045 Cpe09g01107 Cpe-Chr9:9549259 1.12E-141 dispersed
Cpe02g01105 Cpe-Chr2:10106454 Cpe09g01107 Cpe-Chr9:9549259 2.70E-164 dispersed
Cpe03g00717 Cpe-Chr3:4356939 Cpe09g01107 Cpe-Chr9:9549259 1.75E-165 dispersed
Cpe09g01107 Cpe-Chr9:9549259 Cpe13g00542 Cpe-Chr13:5489423 5.38E-129 dispersed
Cpe20g00161 Cpe-Chr20:907565 Cpe09g01107 Cpe-Chr9:9549259 3.73E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62631 PF00069 Pkinase 8.90E-12 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01107 - - csv:101222458 792.727